Gene : AL7G28780 A. lyrata v2.1

Defline:  (1 of 1) K03123 - transcription initiation factor TFIIA small subunit (TFIIA2, GTF2A2, TOA2) Genomic Order:  1800
Name:  ? AL7G28780 Secondary Identifier:  ? PAC:35935937

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G28780 0.5kb upstream 0.5kb upstream 2345   true scaffold_7: 7595838-7598182 Arabidopsis lyrata
AL7G28780 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 7597683-7598182 Arabidopsis lyrata
AL7G28780 0.5kb downstream 0.5kb downstream 2345   true scaffold_7: 7595338-7597682 Arabidopsis lyrata
AL7G28780 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 7595338-7595837 Arabidopsis lyrata
AL7G28780 1.0kb upstream 1.0kb upstream 2845   true scaffold_7: 7595838-7598682 Arabidopsis lyrata
AL7G28780 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 7597683-7598682 Arabidopsis lyrata
AL7G28780 1.0kb downstream 1.0kb downstream 2845   true scaffold_7: 7594838-7597682 Arabidopsis lyrata
AL7G28780 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 7594838-7595837 Arabidopsis lyrata
AL7G28780 2.0kb upstream 2.0kb upstream 3845   true scaffold_7: 7595838-7599682 Arabidopsis lyrata
AL7G28780 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 7597683-7599682 Arabidopsis lyrata
AL7G28780 2.0kb downstream 2.0kb downstream 3845   true scaffold_7: 7593838-7597682 Arabidopsis lyrata
AL7G28780 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 7593838-7595837 Arabidopsis lyrata
AL7G28780 5.0kb upstream 5.0kb upstream 6845   true scaffold_7: 7595838-7602682 Arabidopsis lyrata
AL7G28780 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 7597683-7602682 Arabidopsis lyrata
AL7G28780 5.0kb downstream 5.0kb downstream 6845   true scaffold_7: 7590838-7597682 Arabidopsis lyrata
AL7G28780 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 7590838-7595837 Arabidopsis lyrata
AL7G28780 10.0kb upstream 10.0kb upstream 11845   true scaffold_7: 7595838-7607682 Arabidopsis lyrata
AL7G28780 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 7597683-7607682 Arabidopsis lyrata
AL7G28780 10.0kb downstream 10.0kb downstream 11845   true scaffold_7: 7585838-7597682 Arabidopsis lyrata
AL7G28780 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 7585838-7595837 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364167 5261 Brassicaceae View MSA
123839671 5264 Brassicales-Malvales View MSA
124342942 5266 SBM View MSA
124244097 5268 Malvidae View MSA
124060415 5270 Rosid View MSA
123747373 5271 Pentapetalae View MSA
122787968 5272 Eudicot View MSA
122045425 5273 Angiosperm View MSA
121349813 5274 Embryophyte View MSA
123423825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain