Gene : AL7G29330 A. lyrata v2.1

Defline:  (1 of 4) PTHR13301:SF51 - CELLULOSE SYNTHASE-LIKE PROTEIN G1-RELATED Genomic Order:  1851
Name:  ? AL7G29330 Secondary Identifier:  ? PAC:35937412

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1001 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G29330 0.5kb upstream 0.5kb upstream 4632   true scaffold_7: 7819551-7824182 Arabidopsis lyrata
AL7G29330 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 7823683-7824182 Arabidopsis lyrata
AL7G29330 0.5kb downstream 0.5kb downstream 4632   true scaffold_7: 7819051-7823682 Arabidopsis lyrata
AL7G29330 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 7819051-7819550 Arabidopsis lyrata
AL7G29330 1.0kb upstream 1.0kb upstream 5132   true scaffold_7: 7819551-7824682 Arabidopsis lyrata
AL7G29330 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 7823683-7824682 Arabidopsis lyrata
AL7G29330 1.0kb downstream 1.0kb downstream 5132   true scaffold_7: 7818551-7823682 Arabidopsis lyrata
AL7G29330 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 7818551-7819550 Arabidopsis lyrata
AL7G29330 2.0kb upstream 2.0kb upstream 6132   true scaffold_7: 7819551-7825682 Arabidopsis lyrata
AL7G29330 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 7823683-7825682 Arabidopsis lyrata
AL7G29330 2.0kb downstream 2.0kb downstream 6132   true scaffold_7: 7817551-7823682 Arabidopsis lyrata
AL7G29330 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 7817551-7819550 Arabidopsis lyrata
AL7G29330 5.0kb upstream 5.0kb upstream 9132   true scaffold_7: 7819551-7828682 Arabidopsis lyrata
AL7G29330 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 7823683-7828682 Arabidopsis lyrata
AL7G29330 5.0kb downstream 5.0kb downstream 9132   true scaffold_7: 7814551-7823682 Arabidopsis lyrata
AL7G29330 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 7814551-7819550 Arabidopsis lyrata
AL7G29330 10.0kb upstream 10.0kb upstream 14132   true scaffold_7: 7819551-7833682 Arabidopsis lyrata
AL7G29330 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 7823683-7833682 Arabidopsis lyrata
AL7G29330 10.0kb downstream 10.0kb downstream 14132   true scaffold_7: 7809551-7823682 Arabidopsis lyrata
AL7G29330 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 7809551-7819550 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377822 5261 Brassicaceae View MSA
123840606 5264 Brassicales-Malvales View MSA
124346924 5266 SBM View MSA
124240954 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain