Gene : AL7G24540 A. lyrata v2.1

Defline:  (1 of 2) PTHR12169 - ATPASE N2B Genomic Order:  1394
Name:  ? AL7G24540 Secondary Identifier:  ? PAC:35936203

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ANAEROFRUCAT-PWY Arabidopsis lyrata pathologic  
Alyrata ANAGLYCOLYSIS-PWY Arabidopsis lyrata pathologic  
Alyrata GLUCOSE1PMETAB-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-621 Arabidopsis lyrata pathologic  
Alyrata PWY-7238 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G24540 0.5kb upstream 0.5kb upstream 3281   true scaffold_7: 5891764-5895044 Arabidopsis lyrata
AL7G24540 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 5894545-5895044 Arabidopsis lyrata
AL7G24540 0.5kb downstream 0.5kb downstream 3281   true scaffold_7: 5891264-5894544 Arabidopsis lyrata
AL7G24540 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 5891264-5891763 Arabidopsis lyrata
AL7G24540 1.0kb upstream 1.0kb upstream 3781   true scaffold_7: 5891764-5895544 Arabidopsis lyrata
AL7G24540 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 5894545-5895544 Arabidopsis lyrata
AL7G24540 1.0kb downstream 1.0kb downstream 3781   true scaffold_7: 5890764-5894544 Arabidopsis lyrata
AL7G24540 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 5890764-5891763 Arabidopsis lyrata
AL7G24540 2.0kb upstream 2.0kb upstream 4781   true scaffold_7: 5891764-5896544 Arabidopsis lyrata
AL7G24540 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 5894545-5896544 Arabidopsis lyrata
AL7G24540 2.0kb downstream 2.0kb downstream 4781   true scaffold_7: 5889764-5894544 Arabidopsis lyrata
AL7G24540 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 5889764-5891763 Arabidopsis lyrata
AL7G24540 5.0kb upstream 5.0kb upstream 7781   true scaffold_7: 5891764-5899544 Arabidopsis lyrata
AL7G24540 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 5894545-5899544 Arabidopsis lyrata
AL7G24540 5.0kb downstream 5.0kb downstream 7781   true scaffold_7: 5886764-5894544 Arabidopsis lyrata
AL7G24540 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 5886764-5891763 Arabidopsis lyrata
AL7G24540 10.0kb upstream 10.0kb upstream 12781   true scaffold_7: 5891764-5904544 Arabidopsis lyrata
AL7G24540 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 5894545-5904544 Arabidopsis lyrata
AL7G24540 10.0kb downstream 10.0kb downstream 12781   true scaffold_7: 5881764-5894544 Arabidopsis lyrata
AL7G24540 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 5881764-5891763 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374255 5261 Brassicaceae View MSA
123800714 5264 Brassicales-Malvales View MSA
124346939 5266 SBM View MSA
124240736 5268 Malvidae View MSA
124061792 5270 Rosid View MSA
123752091 5271 Pentapetalae View MSA
122793026 5272 Eudicot View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain