Gene : AL7G24330 A. lyrata v2.1

Defline:  (1 of 8) K10666 - E3 ubiquitin-protein ligase RNF5 (RNF5) Genomic Order:  1373
Name:  ? AL7G24330 Secondary Identifier:  ? PAC:35937346

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G24330 0.5kb upstream 0.5kb upstream 2051   true scaffold_7: 5822952-5825002 Arabidopsis lyrata
AL7G24330 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 5822952-5823451 Arabidopsis lyrata
AL7G24330 0.5kb downstream 0.5kb downstream 2051   true scaffold_7: 5823452-5825502 Arabidopsis lyrata
AL7G24330 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 5825003-5825502 Arabidopsis lyrata
AL7G24330 1.0kb upstream 1.0kb upstream 2551   true scaffold_7: 5822452-5825002 Arabidopsis lyrata
AL7G24330 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 5822452-5823451 Arabidopsis lyrata
AL7G24330 1.0kb downstream 1.0kb downstream 2551   true scaffold_7: 5823452-5826002 Arabidopsis lyrata
AL7G24330 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 5825003-5826002 Arabidopsis lyrata
AL7G24330 2.0kb upstream 2.0kb upstream 3551   true scaffold_7: 5821452-5825002 Arabidopsis lyrata
AL7G24330 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 5821452-5823451 Arabidopsis lyrata
AL7G24330 2.0kb downstream 2.0kb downstream 3551   true scaffold_7: 5823452-5827002 Arabidopsis lyrata
AL7G24330 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 5825003-5827002 Arabidopsis lyrata
AL7G24330 5.0kb upstream 5.0kb upstream 6551   true scaffold_7: 5818452-5825002 Arabidopsis lyrata
AL7G24330 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 5818452-5823451 Arabidopsis lyrata
AL7G24330 5.0kb downstream 5.0kb downstream 6551   true scaffold_7: 5823452-5830002 Arabidopsis lyrata
AL7G24330 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 5825003-5830002 Arabidopsis lyrata
AL7G24330 10.0kb upstream 10.0kb upstream 11551   true scaffold_7: 5813452-5825002 Arabidopsis lyrata
AL7G24330 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 5813452-5823451 Arabidopsis lyrata
AL7G24330 10.0kb downstream 10.0kb downstream 11551   true scaffold_7: 5823452-5835002 Arabidopsis lyrata
AL7G24330 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 5825003-5835002 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362579 5261 Brassicaceae View MSA
123798387 5264 Brassicales-Malvales View MSA
124296028 5266 SBM View MSA
124250976 5268 Malvidae View MSA
123952553 5270 Rosid View MSA
123750753 5271 Pentapetalae View MSA
122796389 5272 Eudicot View MSA
122051949 5273 Angiosperm View MSA
121312825 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain