Gene : AL7G41250 A. lyrata v2.1

Defline:  (1 of 2) 1.13.11.53 - Acireductone dioxygenase (Ni(2+)-requiring) / E-2 Genomic Order:  2959
Name:  ? AL7G41250 Secondary Identifier:  ? PAC:35937765

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-4361 Arabidopsis lyrata pathologic  
Alyrata PWY-5389 Arabidopsis lyrata pathologic  
Alyrata PWY-7270 Arabidopsis lyrata pathologic  
Alyrata PWY-7528 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G41250 0.5kb upstream 0.5kb upstream 2352   true scaffold_7: 13727803-13730154 Arabidopsis lyrata
AL7G41250 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 13727803-13728302 Arabidopsis lyrata
AL7G41250 0.5kb downstream 0.5kb downstream 2352   true scaffold_7: 13728303-13730654 Arabidopsis lyrata
AL7G41250 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 13730155-13730654 Arabidopsis lyrata
AL7G41250 1.0kb upstream 1.0kb upstream 2852   true scaffold_7: 13727303-13730154 Arabidopsis lyrata
AL7G41250 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 13727303-13728302 Arabidopsis lyrata
AL7G41250 1.0kb downstream 1.0kb downstream 2852   true scaffold_7: 13728303-13731154 Arabidopsis lyrata
AL7G41250 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 13730155-13731154 Arabidopsis lyrata
AL7G41250 2.0kb upstream 2.0kb upstream 3852   true scaffold_7: 13726303-13730154 Arabidopsis lyrata
AL7G41250 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 13726303-13728302 Arabidopsis lyrata
AL7G41250 2.0kb downstream 2.0kb downstream 3852   true scaffold_7: 13728303-13732154 Arabidopsis lyrata
AL7G41250 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 13730155-13732154 Arabidopsis lyrata
AL7G41250 5.0kb upstream 5.0kb upstream 6852   true scaffold_7: 13723303-13730154 Arabidopsis lyrata
AL7G41250 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 13723303-13728302 Arabidopsis lyrata
AL7G41250 5.0kb downstream 5.0kb downstream 6852   true scaffold_7: 13728303-13735154 Arabidopsis lyrata
AL7G41250 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 13730155-13735154 Arabidopsis lyrata
AL7G41250 10.0kb upstream 10.0kb upstream 11852   true scaffold_7: 13718303-13730154 Arabidopsis lyrata
AL7G41250 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 13718303-13728302 Arabidopsis lyrata
AL7G41250 10.0kb downstream 10.0kb downstream 11852   true scaffold_7: 13728303-13740154 Arabidopsis lyrata
AL7G41250 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 13730155-13740154 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378122 5261 Brassicaceae View MSA
123834658 5264 Brassicales-Malvales View MSA
124340730 5266 SBM View MSA
124241214 5268 Malvidae View MSA
124070123 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain