Gene : AL8G11400 A. lyrata v2.1
Defline:  (1 of 1) KOG0490 - Transcription factor, contains HOX domain Genomic Order:  130
Name:  ? AL8G11400 Secondary Identifier:  ? PAC:35950154
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G11400 0.5kb upstream 0.5kb upstream 5208   true scaffold_8: 652999-658206 Arabidopsis lyrata
AL8G11400 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 657707-658206 Arabidopsis lyrata
AL8G11400 0.5kb downstream 0.5kb downstream 5208   true scaffold_8: 652499-657706 Arabidopsis lyrata
AL8G11400 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 652499-652998 Arabidopsis lyrata
AL8G11400 1.0kb upstream 1.0kb upstream 5708   true scaffold_8: 652999-658706 Arabidopsis lyrata
AL8G11400 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 657707-658706 Arabidopsis lyrata
AL8G11400 1.0kb downstream 1.0kb downstream 5708   true scaffold_8: 651999-657706 Arabidopsis lyrata
AL8G11400 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 651999-652998 Arabidopsis lyrata
AL8G11400 2.0kb upstream 2.0kb upstream 6708   true scaffold_8: 652999-659706 Arabidopsis lyrata
AL8G11400 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 657707-659706 Arabidopsis lyrata
AL8G11400 2.0kb downstream 2.0kb downstream 6708   true scaffold_8: 650999-657706 Arabidopsis lyrata
AL8G11400 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 650999-652998 Arabidopsis lyrata
AL8G11400 5.0kb upstream 5.0kb upstream 9708   true scaffold_8: 652999-662706 Arabidopsis lyrata
AL8G11400 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 657707-662706 Arabidopsis lyrata
AL8G11400 5.0kb downstream 5.0kb downstream 9708   true scaffold_8: 647999-657706 Arabidopsis lyrata
AL8G11400 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 647999-652998 Arabidopsis lyrata
AL8G11400 10.0kb upstream 10.0kb upstream 14708   true scaffold_8: 652999-667706 Arabidopsis lyrata
AL8G11400 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 657707-667706 Arabidopsis lyrata
AL8G11400 10.0kb downstream 10.0kb downstream 14708   true scaffold_8: 642999-657706 Arabidopsis lyrata
AL8G11400 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 642999-652998 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360243 5261 Brassicaceae View MSA
123829065 5264 Brassicales-Malvales View MSA
124343768 5266 SBM View MSA
124237830 5268 Malvidae View MSA
124065425 5270 Rosid View MSA
123738809 5271 Pentapetalae View MSA
122790859 5272 Eudicot View MSA
122045616 5273 Angiosperm View MSA
121310473 5274 Embryophyte View MSA
123347945 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain