Gene : AL8G11280 A. lyrata v2.1

Defline:  (1 of 5) PTHR31517:SF11 - PEROXIDASE 31-RELATED Genomic Order:  119
Name:  ? AL8G11280 Secondary Identifier:  ? PAC:35951040

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5466 Arabidopsis lyrata pathologic  
Alyrata PWY-7214 Arabidopsis lyrata pathologic  
Alyrata PWY-7445 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G11280 0.5kb upstream 0.5kb upstream 1818   true scaffold_8: 607581-609398 Arabidopsis lyrata
AL8G11280 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 607581-608080 Arabidopsis lyrata
AL8G11280 0.5kb downstream 0.5kb downstream 1818   true scaffold_8: 608081-609898 Arabidopsis lyrata
AL8G11280 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 609399-609898 Arabidopsis lyrata
AL8G11280 1.0kb upstream 1.0kb upstream 2318   true scaffold_8: 607081-609398 Arabidopsis lyrata
AL8G11280 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 607081-608080 Arabidopsis lyrata
AL8G11280 1.0kb downstream 1.0kb downstream 2318   true scaffold_8: 608081-610398 Arabidopsis lyrata
AL8G11280 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 609399-610398 Arabidopsis lyrata
AL8G11280 2.0kb upstream 2.0kb upstream 3318   true scaffold_8: 606081-609398 Arabidopsis lyrata
AL8G11280 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 606081-608080 Arabidopsis lyrata
AL8G11280 2.0kb downstream 2.0kb downstream 3318   true scaffold_8: 608081-611398 Arabidopsis lyrata
AL8G11280 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 609399-611398 Arabidopsis lyrata
AL8G11280 5.0kb upstream 5.0kb upstream 6318   true scaffold_8: 603081-609398 Arabidopsis lyrata
AL8G11280 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 603081-608080 Arabidopsis lyrata
AL8G11280 5.0kb downstream 5.0kb downstream 6318   true scaffold_8: 608081-614398 Arabidopsis lyrata
AL8G11280 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 609399-614398 Arabidopsis lyrata
AL8G11280 10.0kb upstream 10.0kb upstream 11318   true scaffold_8: 598081-609398 Arabidopsis lyrata
AL8G11280 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 598081-608080 Arabidopsis lyrata
AL8G11280 10.0kb downstream 10.0kb downstream 11318   true scaffold_8: 608081-619398 Arabidopsis lyrata
AL8G11280 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 609399-619398 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365146 5261 Brassicaceae View MSA
123839125 5264 Brassicales-Malvales View MSA
124339069 5266 SBM View MSA
124243658 5268 Malvidae View MSA
124069813 5270 Rosid View MSA
123741716 5271 Pentapetalae View MSA
122795989 5272 Eudicot View MSA
122048017 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain