Gene : AL8G10790 A. lyrata v2.1

Defline:  (1 of 1) PTHR13994:SF9 - NUDIX HYDROLASE 8 Genomic Order:  72
Name:  ? AL8G10790 Secondary Identifier:  ? PAC:35951075

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5381 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G10790 0.5kb upstream 0.5kb upstream 2419   true scaffold_8: 308500-310918 Arabidopsis lyrata
AL8G10790 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 310419-310918 Arabidopsis lyrata
AL8G10790 0.5kb downstream 0.5kb downstream 2419   true scaffold_8: 308000-310418 Arabidopsis lyrata
AL8G10790 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 308000-308499 Arabidopsis lyrata
AL8G10790 1.0kb upstream 1.0kb upstream 2919   true scaffold_8: 308500-311418 Arabidopsis lyrata
AL8G10790 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 310419-311418 Arabidopsis lyrata
AL8G10790 1.0kb downstream 1.0kb downstream 2919   true scaffold_8: 307500-310418 Arabidopsis lyrata
AL8G10790 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 307500-308499 Arabidopsis lyrata
AL8G10790 2.0kb upstream 2.0kb upstream 3919   true scaffold_8: 308500-312418 Arabidopsis lyrata
AL8G10790 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 310419-312418 Arabidopsis lyrata
AL8G10790 2.0kb downstream 2.0kb downstream 3919   true scaffold_8: 306500-310418 Arabidopsis lyrata
AL8G10790 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 306500-308499 Arabidopsis lyrata
AL8G10790 5.0kb upstream 5.0kb upstream 6919   true scaffold_8: 308500-315418 Arabidopsis lyrata
AL8G10790 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 310419-315418 Arabidopsis lyrata
AL8G10790 5.0kb downstream 5.0kb downstream 6919   true scaffold_8: 303500-310418 Arabidopsis lyrata
AL8G10790 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 303500-308499 Arabidopsis lyrata
AL8G10790 10.0kb upstream 10.0kb upstream 11919   true scaffold_8: 308500-320418 Arabidopsis lyrata
AL8G10790 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 310419-320418 Arabidopsis lyrata
AL8G10790 10.0kb downstream 10.0kb downstream 11919   true scaffold_8: 298500-310418 Arabidopsis lyrata
AL8G10790 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 298500-308499 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369206 5261 Brassicaceae View MSA
123828958 5264 Brassicales-Malvales View MSA
124337528 5266 SBM View MSA
124238043 5268 Malvidae View MSA
124050440 5270 Rosid View MSA
123741366 5271 Pentapetalae View MSA
122785927 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain