Gene : AL7G52540 A. lyrata v2.1

Defline:  (1 of 2) PF00069//PF00314 - Protein kinase domain (Pkinase) // Thaumatin family (Thaumatin) Genomic Order:  3935
Name:  ? AL7G52540 Secondary Identifier:  ? PAC:35938500

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7409 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G52540 0.5kb upstream 0.5kb upstream 3518   true scaffold_7: 24220308-24223825 Arabidopsis lyrata
AL7G52540 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 24220308-24220807 Arabidopsis lyrata
AL7G52540 0.5kb downstream 0.5kb downstream 3518   true scaffold_7: 24220808-24224325 Arabidopsis lyrata
AL7G52540 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 24223826-24224325 Arabidopsis lyrata
AL7G52540 1.0kb upstream 1.0kb upstream 4018   true scaffold_7: 24219808-24223825 Arabidopsis lyrata
AL7G52540 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 24219808-24220807 Arabidopsis lyrata
AL7G52540 1.0kb downstream 1.0kb downstream 4018   true scaffold_7: 24220808-24224825 Arabidopsis lyrata
AL7G52540 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 24223826-24224825 Arabidopsis lyrata
AL7G52540 2.0kb upstream 2.0kb upstream 5018   true scaffold_7: 24218808-24223825 Arabidopsis lyrata
AL7G52540 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 24218808-24220807 Arabidopsis lyrata
AL7G52540 2.0kb downstream 2.0kb downstream 5018   true scaffold_7: 24220808-24225825 Arabidopsis lyrata
AL7G52540 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 24223826-24225825 Arabidopsis lyrata
AL7G52540 5.0kb upstream 5.0kb upstream 8018   true scaffold_7: 24215808-24223825 Arabidopsis lyrata
AL7G52540 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 24215808-24220807 Arabidopsis lyrata
AL7G52540 5.0kb downstream 5.0kb downstream 8018   true scaffold_7: 24220808-24228825 Arabidopsis lyrata
AL7G52540 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 24223826-24228825 Arabidopsis lyrata
AL7G52540 10.0kb upstream 10.0kb upstream 13018   true scaffold_7: 24210808-24223825 Arabidopsis lyrata
AL7G52540 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 24210808-24220807 Arabidopsis lyrata
AL7G52540 10.0kb downstream 10.0kb downstream 13018   true scaffold_7: 24220808-24233825 Arabidopsis lyrata
AL7G52540 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 24223826-24233825 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381708 5261 Brassicaceae View MSA
123841678 5264 Brassicales-Malvales View MSA
124350842 5266 SBM View MSA
124254633 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain