Gene : AL7G52150 A. lyrata v2.1

Defline:  (1 of 4) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS) Genomic Order:  3903
Name:  ? AL7G52150 Secondary Identifier:  ? PAC:35938493

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata CALVIN-PWY Arabidopsis lyrata pathologic  
Alyrata PHOTOALL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-5723 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G52150 0.5kb upstream 0.5kb upstream 1455   true scaffold_7: 23993917-23995371 Arabidopsis lyrata
AL7G52150 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 23993917-23994416 Arabidopsis lyrata
AL7G52150 0.5kb downstream 0.5kb downstream 1455   true scaffold_7: 23994417-23995871 Arabidopsis lyrata
AL7G52150 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 23995372-23995871 Arabidopsis lyrata
AL7G52150 1.0kb upstream 1.0kb upstream 1955   true scaffold_7: 23993417-23995371 Arabidopsis lyrata
AL7G52150 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 23993417-23994416 Arabidopsis lyrata
AL7G52150 1.0kb downstream 1.0kb downstream 1955   true scaffold_7: 23994417-23996371 Arabidopsis lyrata
AL7G52150 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 23995372-23996371 Arabidopsis lyrata
AL7G52150 2.0kb upstream 2.0kb upstream 2955   true scaffold_7: 23992417-23995371 Arabidopsis lyrata
AL7G52150 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 23992417-23994416 Arabidopsis lyrata
AL7G52150 2.0kb downstream 2.0kb downstream 2955   true scaffold_7: 23994417-23997371 Arabidopsis lyrata
AL7G52150 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 23995372-23997371 Arabidopsis lyrata
AL7G52150 5.0kb upstream 5.0kb upstream 5955   true scaffold_7: 23989417-23995371 Arabidopsis lyrata
AL7G52150 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 23989417-23994416 Arabidopsis lyrata
AL7G52150 5.0kb downstream 5.0kb downstream 5955   true scaffold_7: 23994417-24000371 Arabidopsis lyrata
AL7G52150 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 23995372-24000371 Arabidopsis lyrata
AL7G52150 10.0kb upstream 10.0kb upstream 10955   true scaffold_7: 23984417-23995371 Arabidopsis lyrata
AL7G52150 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 23984417-23994416 Arabidopsis lyrata
AL7G52150 10.0kb downstream 10.0kb downstream 10955   true scaffold_7: 23994417-24005371 Arabidopsis lyrata
AL7G52150 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 23995372-24005371 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380509 5261 Brassicaceae View MSA
123836682 5264 Brassicales-Malvales View MSA
124340616 5266 SBM View MSA
124250367 5268 Malvidae View MSA
124066802 5270 Rosid View MSA
123747186 5271 Pentapetalae View MSA
122796864 5272 Eudicot View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain