Gene : AL697U10020 A. lyrata v2.1

Defline:  (1 of 4) K04460 - serine/threonine-protein phosphatase 5 (PPP5C) Genomic Order:  2
Name:  ? AL697U10020 Secondary Identifier:  ? PAC:35947551

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL697U10020 0.5kb upstream 0.5kb upstream 2613   true scaffold_697: 326-2938 Arabidopsis lyrata
AL697U10020 0.5kb upstream 0.5kb upstream 500   false scaffold_697: 326-825 Arabidopsis lyrata
AL697U10020 0.5kb downstream 0.5kb downstream 2613   true scaffold_697: 826-3438 Arabidopsis lyrata
AL697U10020 0.5kb downstream 0.5kb downstream 500   false scaffold_697: 2939-3438 Arabidopsis lyrata
AL697U10020 1.0kb upstream 1.0kb upstream 2938   true scaffold_697: 1-2938 Arabidopsis lyrata
AL697U10020 1.0kb upstream 1.0kb upstream 825   false scaffold_697: 1-825 Arabidopsis lyrata
AL697U10020 1.0kb downstream 1.0kb downstream 3113   true scaffold_697: 826-3938 Arabidopsis lyrata
AL697U10020 1.0kb downstream 1.0kb downstream 1000   false scaffold_697: 2939-3938 Arabidopsis lyrata
AL697U10020 2.0kb upstream 2.0kb upstream 2938   true scaffold_697: 1-2938 Arabidopsis lyrata
AL697U10020 2.0kb upstream 2.0kb upstream 825   false scaffold_697: 1-825 Arabidopsis lyrata
AL697U10020 2.0kb downstream 2.0kb downstream 4113   true scaffold_697: 826-4938 Arabidopsis lyrata
AL697U10020 2.0kb downstream 2.0kb downstream 2000   false scaffold_697: 2939-4938 Arabidopsis lyrata
AL697U10020 5.0kb upstream 5.0kb upstream 2938   true scaffold_697: 1-2938 Arabidopsis lyrata
AL697U10020 5.0kb upstream 5.0kb upstream 825   false scaffold_697: 1-825 Arabidopsis lyrata
AL697U10020 5.0kb downstream 5.0kb downstream 4154   true scaffold_697: 826-4979 Arabidopsis lyrata
AL697U10020 5.0kb downstream 5.0kb downstream 2041   false scaffold_697: 2939-4979 Arabidopsis lyrata
AL697U10020 10.0kb upstream 10.0kb upstream 2938   true scaffold_697: 1-2938 Arabidopsis lyrata
AL697U10020 10.0kb upstream 10.0kb upstream 825   false scaffold_697: 1-825 Arabidopsis lyrata
AL697U10020 10.0kb downstream 10.0kb downstream 4154   true scaffold_697: 826-4979 Arabidopsis lyrata
AL697U10020 10.0kb downstream 10.0kb downstream 2041   false scaffold_697: 2939-4979 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374008 5261 Brassicaceae View MSA
123830592 5264 Brassicales-Malvales View MSA
124341433 5266 SBM View MSA
124237227 5268 Malvidae View MSA
124063485 5270 Rosid View MSA
123740656 5271 Pentapetalae View MSA
122789089 5272 Eudicot View MSA
122047426 5273 Angiosperm View MSA
123429115 5275 Viridiplantae View MSA
121344801 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain