Gene : AL7G49090 A. lyrata v2.1

Defline:  (1 of 3) K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) Genomic Order:  3629
Name:  ? AL7G49090 Secondary Identifier:  ? PAC:35936754

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3781 Arabidopsis lyrata pathologic  
Alyrata PWY-4302 Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PWY-561 Arabidopsis lyrata pathologic  
Alyrata PWY-5690 Arabidopsis lyrata pathologic  
Alyrata PWY-7279 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G49090 0.5kb upstream 0.5kb upstream 2559   true scaffold_7: 22068451-22071009 Arabidopsis lyrata
AL7G49090 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 22070510-22071009 Arabidopsis lyrata
AL7G49090 0.5kb downstream 0.5kb downstream 2559   true scaffold_7: 22067951-22070509 Arabidopsis lyrata
AL7G49090 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 22067951-22068450 Arabidopsis lyrata
AL7G49090 1.0kb upstream 1.0kb upstream 3059   true scaffold_7: 22068451-22071509 Arabidopsis lyrata
AL7G49090 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 22070510-22071509 Arabidopsis lyrata
AL7G49090 1.0kb downstream 1.0kb downstream 3059   true scaffold_7: 22067451-22070509 Arabidopsis lyrata
AL7G49090 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 22067451-22068450 Arabidopsis lyrata
AL7G49090 2.0kb upstream 2.0kb upstream 4059   true scaffold_7: 22068451-22072509 Arabidopsis lyrata
AL7G49090 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 22070510-22072509 Arabidopsis lyrata
AL7G49090 2.0kb downstream 2.0kb downstream 4059   true scaffold_7: 22066451-22070509 Arabidopsis lyrata
AL7G49090 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 22066451-22068450 Arabidopsis lyrata
AL7G49090 5.0kb upstream 5.0kb upstream 7059   true scaffold_7: 22068451-22075509 Arabidopsis lyrata
AL7G49090 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 22070510-22075509 Arabidopsis lyrata
AL7G49090 5.0kb downstream 5.0kb downstream 7059   true scaffold_7: 22063451-22070509 Arabidopsis lyrata
AL7G49090 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 22063451-22068450 Arabidopsis lyrata
AL7G49090 10.0kb upstream 10.0kb upstream 12059   true scaffold_7: 22068451-22080509 Arabidopsis lyrata
AL7G49090 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 22070510-22080509 Arabidopsis lyrata
AL7G49090 10.0kb downstream 10.0kb downstream 12059   true scaffold_7: 22058451-22070509 Arabidopsis lyrata
AL7G49090 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 22058451-22068450 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377104 5261 Brassicaceae View MSA
123827832 5264 Brassicales-Malvales View MSA
124342277 5266 SBM View MSA
124240423 5268 Malvidae View MSA
124072619 5270 Rosid View MSA
123748072 5271 Pentapetalae View MSA
122787884 5272 Eudicot View MSA
122049105 5273 Angiosperm View MSA
121351479 5274 Embryophyte View MSA
123424532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain