Gene : AL7G48910 A. lyrata v2.1

Defline:  (1 of 1) K00413 - ubiquinol-cytochrome c reductase cytochrome c1 subunit (CYC1, CYT1, petC) Genomic Order:  3611
Name:  ? AL7G48910 Secondary Identifier:  ? PAC:35937715

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3781 Arabidopsis lyrata pathologic  
Alyrata PWY-7279 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G48910 0.5kb upstream 0.5kb upstream 3132   true scaffold_7: 21992951-21996082 Arabidopsis lyrata
AL7G48910 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 21995583-21996082 Arabidopsis lyrata
AL7G48910 0.5kb downstream 0.5kb downstream 3132   true scaffold_7: 21992451-21995582 Arabidopsis lyrata
AL7G48910 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 21992451-21992950 Arabidopsis lyrata
AL7G48910 1.0kb upstream 1.0kb upstream 3632   true scaffold_7: 21992951-21996582 Arabidopsis lyrata
AL7G48910 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 21995583-21996582 Arabidopsis lyrata
AL7G48910 1.0kb downstream 1.0kb downstream 3632   true scaffold_7: 21991951-21995582 Arabidopsis lyrata
AL7G48910 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 21991951-21992950 Arabidopsis lyrata
AL7G48910 2.0kb upstream 2.0kb upstream 4632   true scaffold_7: 21992951-21997582 Arabidopsis lyrata
AL7G48910 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 21995583-21997582 Arabidopsis lyrata
AL7G48910 2.0kb downstream 2.0kb downstream 4632   true scaffold_7: 21990951-21995582 Arabidopsis lyrata
AL7G48910 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 21990951-21992950 Arabidopsis lyrata
AL7G48910 5.0kb upstream 5.0kb upstream 7632   true scaffold_7: 21992951-22000582 Arabidopsis lyrata
AL7G48910 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 21995583-22000582 Arabidopsis lyrata
AL7G48910 5.0kb downstream 5.0kb downstream 7632   true scaffold_7: 21987951-21995582 Arabidopsis lyrata
AL7G48910 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 21987951-21992950 Arabidopsis lyrata
AL7G48910 10.0kb upstream 10.0kb upstream 12632   true scaffold_7: 21992951-22005582 Arabidopsis lyrata
AL7G48910 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 21995583-22005582 Arabidopsis lyrata
AL7G48910 10.0kb downstream 10.0kb downstream 12632   true scaffold_7: 21982951-21995582 Arabidopsis lyrata
AL7G48910 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 21982951-21992950 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376312 5261 Brassicaceae View MSA
123830928 5264 Brassicales-Malvales View MSA
124345956 5266 SBM View MSA
124248685 5268 Malvidae View MSA
124073211 5270 Rosid View MSA
123745446 5271 Pentapetalae View MSA
122788425 5272 Eudicot View MSA
122048813 5273 Angiosperm View MSA
121344559 5274 Embryophyte View MSA
123427665 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain