Gene : AL7G49550 A. lyrata v2.1

Defline:  (1 of 1) PTHR10168//PTHR10168:SF104 - GLUTAREDOXIN // SUBFAMILY NOT NAMED Genomic Order:  3669
Name:  ? AL7G49550 Secondary Identifier:  ? PAC:35936749

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata THIOREDOX-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G49550 0.5kb upstream 0.5kb upstream 2330   true scaffold_7: 22375211-22377540 Arabidopsis lyrata
AL7G49550 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 22375211-22375710 Arabidopsis lyrata
AL7G49550 0.5kb downstream 0.5kb downstream 2330   true scaffold_7: 22375711-22378040 Arabidopsis lyrata
AL7G49550 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 22377541-22378040 Arabidopsis lyrata
AL7G49550 1.0kb upstream 1.0kb upstream 2830   true scaffold_7: 22374711-22377540 Arabidopsis lyrata
AL7G49550 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 22374711-22375710 Arabidopsis lyrata
AL7G49550 1.0kb downstream 1.0kb downstream 2830   true scaffold_7: 22375711-22378540 Arabidopsis lyrata
AL7G49550 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 22377541-22378540 Arabidopsis lyrata
AL7G49550 2.0kb upstream 2.0kb upstream 3830   true scaffold_7: 22373711-22377540 Arabidopsis lyrata
AL7G49550 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 22373711-22375710 Arabidopsis lyrata
AL7G49550 2.0kb downstream 2.0kb downstream 3830   true scaffold_7: 22375711-22379540 Arabidopsis lyrata
AL7G49550 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 22377541-22379540 Arabidopsis lyrata
AL7G49550 5.0kb upstream 5.0kb upstream 6830   true scaffold_7: 22370711-22377540 Arabidopsis lyrata
AL7G49550 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 22370711-22375710 Arabidopsis lyrata
AL7G49550 5.0kb downstream 5.0kb downstream 6830   true scaffold_7: 22375711-22382540 Arabidopsis lyrata
AL7G49550 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 22377541-22382540 Arabidopsis lyrata
AL7G49550 10.0kb upstream 10.0kb upstream 11830   true scaffold_7: 22365711-22377540 Arabidopsis lyrata
AL7G49550 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 22365711-22375710 Arabidopsis lyrata
AL7G49550 10.0kb downstream 10.0kb downstream 11830   true scaffold_7: 22375711-22387540 Arabidopsis lyrata
AL7G49550 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 22377541-22387540 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361670 5261 Brassicaceae View MSA
123833232 5264 Brassicales-Malvales View MSA
124346532 5266 SBM View MSA
124248160 5268 Malvidae View MSA
124065401 5270 Rosid View MSA
123746542 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain