Gene : AL7G48230 A. lyrata v2.1

Defline:  (1 of 1) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN Genomic Order:  3547
Name:  ? AL7G48230 Secondary Identifier:  ? PAC:35937676

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6842 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G48230 0.5kb upstream 0.5kb upstream 2225   true scaffold_7: 21682066-21684290 Arabidopsis lyrata
AL7G48230 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 21682066-21682565 Arabidopsis lyrata
AL7G48230 0.5kb downstream 0.5kb downstream 2225   true scaffold_7: 21682566-21684790 Arabidopsis lyrata
AL7G48230 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 21684291-21684790 Arabidopsis lyrata
AL7G48230 1.0kb upstream 1.0kb upstream 2725   true scaffold_7: 21681566-21684290 Arabidopsis lyrata
AL7G48230 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 21681566-21682565 Arabidopsis lyrata
AL7G48230 1.0kb downstream 1.0kb downstream 2725   true scaffold_7: 21682566-21685290 Arabidopsis lyrata
AL7G48230 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 21684291-21685290 Arabidopsis lyrata
AL7G48230 2.0kb upstream 2.0kb upstream 3725   true scaffold_7: 21680566-21684290 Arabidopsis lyrata
AL7G48230 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 21680566-21682565 Arabidopsis lyrata
AL7G48230 2.0kb downstream 2.0kb downstream 3725   true scaffold_7: 21682566-21686290 Arabidopsis lyrata
AL7G48230 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 21684291-21686290 Arabidopsis lyrata
AL7G48230 5.0kb upstream 5.0kb upstream 6725   true scaffold_7: 21677566-21684290 Arabidopsis lyrata
AL7G48230 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 21677566-21682565 Arabidopsis lyrata
AL7G48230 5.0kb downstream 5.0kb downstream 6725   true scaffold_7: 21682566-21689290 Arabidopsis lyrata
AL7G48230 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 21684291-21689290 Arabidopsis lyrata
AL7G48230 10.0kb upstream 10.0kb upstream 11725   true scaffold_7: 21672566-21684290 Arabidopsis lyrata
AL7G48230 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 21672566-21682565 Arabidopsis lyrata
AL7G48230 10.0kb downstream 10.0kb downstream 11725   true scaffold_7: 21682566-21694290 Arabidopsis lyrata
AL7G48230 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 21684291-21694290 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
122374727 5261 Brassicaceae View MSA
123835708 5264 Brassicales-Malvales View MSA
124339383 5266 SBM View MSA
124240290 5268 Malvidae View MSA
124063351 5270 Rosid View MSA
123751759 5271 Pentapetalae View MSA
122789366 5272 Eudicot View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain