Gene : AL7G52870 A. lyrata v2.1

Defline:  (1 of 1) PTHR23012//PTHR23012:SF89 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Genomic Order:  3959
Name:  ? AL7G52870 Secondary Identifier:  ? PAC:35936603

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G52870 0.5kb upstream 0.5kb upstream 1940   true scaffold_7: 24461923-24463862 Arabidopsis lyrata
AL7G52870 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 24463363-24463862 Arabidopsis lyrata
AL7G52870 0.5kb downstream 0.5kb downstream 1940   true scaffold_7: 24461423-24463362 Arabidopsis lyrata
AL7G52870 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 24461423-24461922 Arabidopsis lyrata
AL7G52870 1.0kb upstream 1.0kb upstream 2440   true scaffold_7: 24461923-24464362 Arabidopsis lyrata
AL7G52870 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 24463363-24464362 Arabidopsis lyrata
AL7G52870 1.0kb downstream 1.0kb downstream 2440   true scaffold_7: 24460923-24463362 Arabidopsis lyrata
AL7G52870 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 24460923-24461922 Arabidopsis lyrata
AL7G52870 2.0kb upstream 2.0kb upstream 3440   true scaffold_7: 24461923-24465362 Arabidopsis lyrata
AL7G52870 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 24463363-24465362 Arabidopsis lyrata
AL7G52870 2.0kb downstream 2.0kb downstream 3440   true scaffold_7: 24459923-24463362 Arabidopsis lyrata
AL7G52870 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 24459923-24461922 Arabidopsis lyrata
AL7G52870 5.0kb upstream 5.0kb upstream 6440   true scaffold_7: 24461923-24468362 Arabidopsis lyrata
AL7G52870 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 24463363-24468362 Arabidopsis lyrata
AL7G52870 5.0kb downstream 5.0kb downstream 6440   true scaffold_7: 24456923-24463362 Arabidopsis lyrata
AL7G52870 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 24456923-24461922 Arabidopsis lyrata
AL7G52870 10.0kb upstream 10.0kb upstream 11440   true scaffold_7: 24461923-24473362 Arabidopsis lyrata
AL7G52870 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 24463363-24473362 Arabidopsis lyrata
AL7G52870 10.0kb downstream 10.0kb downstream 11440   true scaffold_7: 24451923-24463362 Arabidopsis lyrata
AL7G52870 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 24451923-24461922 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041328 5273 Angiosperm View MSA
122372334 5261 Brassicaceae View MSA
123800339 5264 Brassicales-Malvales View MSA
124297760 5266 SBM View MSA
124250999 5268 Malvidae View MSA
124072667 5270 Rosid View MSA
123750896 5271 Pentapetalae View MSA
122789616 5272 Eudicot View MSA
121309830 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain