Gene : AL7G46550 A. lyrata v2.1

Defline:  (1 of 1) PTHR21493//PTHR21493:SF150 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3396
Name:  ? AL7G46550 Secondary Identifier:  ? PAC:35937867

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata LIPAS-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G46550 0.5kb upstream 0.5kb upstream 3413   true scaffold_7: 20641899-20645311 Arabidopsis lyrata
AL7G46550 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 20641899-20642398 Arabidopsis lyrata
AL7G46550 0.5kb downstream 0.5kb downstream 3413   true scaffold_7: 20642399-20645811 Arabidopsis lyrata
AL7G46550 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 20645312-20645811 Arabidopsis lyrata
AL7G46550 1.0kb upstream 1.0kb upstream 3913   true scaffold_7: 20641399-20645311 Arabidopsis lyrata
AL7G46550 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 20641399-20642398 Arabidopsis lyrata
AL7G46550 1.0kb downstream 1.0kb downstream 3913   true scaffold_7: 20642399-20646311 Arabidopsis lyrata
AL7G46550 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 20645312-20646311 Arabidopsis lyrata
AL7G46550 2.0kb upstream 2.0kb upstream 4913   true scaffold_7: 20640399-20645311 Arabidopsis lyrata
AL7G46550 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 20640399-20642398 Arabidopsis lyrata
AL7G46550 2.0kb downstream 2.0kb downstream 4913   true scaffold_7: 20642399-20647311 Arabidopsis lyrata
AL7G46550 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 20645312-20647311 Arabidopsis lyrata
AL7G46550 5.0kb upstream 5.0kb upstream 7913   true scaffold_7: 20637399-20645311 Arabidopsis lyrata
AL7G46550 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 20637399-20642398 Arabidopsis lyrata
AL7G46550 5.0kb downstream 5.0kb downstream 7913   true scaffold_7: 20642399-20650311 Arabidopsis lyrata
AL7G46550 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 20645312-20650311 Arabidopsis lyrata
AL7G46550 10.0kb upstream 10.0kb upstream 12913   true scaffold_7: 20632399-20645311 Arabidopsis lyrata
AL7G46550 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 20632399-20642398 Arabidopsis lyrata
AL7G46550 10.0kb downstream 10.0kb downstream 12913   true scaffold_7: 20642399-20655311 Arabidopsis lyrata
AL7G46550 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 20645312-20655311 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374851 5261 Brassicaceae View MSA
123828091 5264 Brassicales-Malvales View MSA
124336785 5266 SBM View MSA
124239204 5268 Malvidae View MSA
124061291 5270 Rosid View MSA
123749324 5271 Pentapetalae View MSA
122786389 5272 Eudicot View MSA
122044867 5273 Angiosperm View MSA
121350799 5274 Embryophyte View MSA
123381889 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain