Gene : AL8G25140 A. lyrata v2.1

Defline:  (1 of 2) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  1317
Name:  ? AL8G25140 Secondary Identifier:  ? PAC:35948219

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PWY-561 Arabidopsis lyrata pathologic  
Alyrata PWY-5690 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G25140 0.5kb upstream 0.5kb upstream 5409   true scaffold_8: 14230310-14235718 Arabidopsis lyrata
AL8G25140 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 14230310-14230809 Arabidopsis lyrata
AL8G25140 0.5kb downstream 0.5kb downstream 5409   true scaffold_8: 14230810-14236218 Arabidopsis lyrata
AL8G25140 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 14235719-14236218 Arabidopsis lyrata
AL8G25140 1.0kb upstream 1.0kb upstream 5909   true scaffold_8: 14229810-14235718 Arabidopsis lyrata
AL8G25140 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 14229810-14230809 Arabidopsis lyrata
AL8G25140 1.0kb downstream 1.0kb downstream 5909   true scaffold_8: 14230810-14236718 Arabidopsis lyrata
AL8G25140 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 14235719-14236718 Arabidopsis lyrata
AL8G25140 2.0kb upstream 2.0kb upstream 6909   true scaffold_8: 14228810-14235718 Arabidopsis lyrata
AL8G25140 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 14228810-14230809 Arabidopsis lyrata
AL8G25140 2.0kb downstream 2.0kb downstream 6909   true scaffold_8: 14230810-14237718 Arabidopsis lyrata
AL8G25140 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 14235719-14237718 Arabidopsis lyrata
AL8G25140 5.0kb upstream 5.0kb upstream 9909   true scaffold_8: 14225810-14235718 Arabidopsis lyrata
AL8G25140 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 14225810-14230809 Arabidopsis lyrata
AL8G25140 5.0kb downstream 5.0kb downstream 9909   true scaffold_8: 14230810-14240718 Arabidopsis lyrata
AL8G25140 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 14235719-14240718 Arabidopsis lyrata
AL8G25140 10.0kb upstream 10.0kb upstream 14909   true scaffold_8: 14220810-14235718 Arabidopsis lyrata
AL8G25140 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 14220810-14230809 Arabidopsis lyrata
AL8G25140 10.0kb downstream 10.0kb downstream 14909   true scaffold_8: 14230810-14245718 Arabidopsis lyrata
AL8G25140 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 14235719-14245718 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373971 5261 Brassicaceae View MSA
123829006 5264 Brassicales-Malvales View MSA
124336503 5266 SBM View MSA
124247146 5268 Malvidae View MSA
124069053 5270 Rosid View MSA
123742189 5271 Pentapetalae View MSA
122791396 5272 Eudicot View MSA
122047120 5273 Angiosperm View MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain