Gene : AL8G22480 A. lyrata v2.1
Defline:  (1 of 2) K11858 - ubiquitin carboxyl-terminal hydrolase 48 [EC:3.4.19.12] (USP48) Genomic Order:  1076
Name:  ? AL8G22480 Secondary Identifier:  ? PAC:35949503
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G22480 0.5kb upstream 0.5kb upstream 7857   true scaffold_8: 12507211-12515067 Arabidopsis lyrata
AL8G22480 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 12507211-12507710 Arabidopsis lyrata
AL8G22480 0.5kb downstream 0.5kb downstream 7857   true scaffold_8: 12507711-12515567 Arabidopsis lyrata
AL8G22480 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 12515068-12515567 Arabidopsis lyrata
AL8G22480 1.0kb upstream 1.0kb upstream 8357   true scaffold_8: 12506711-12515067 Arabidopsis lyrata
AL8G22480 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 12506711-12507710 Arabidopsis lyrata
AL8G22480 1.0kb downstream 1.0kb downstream 8357   true scaffold_8: 12507711-12516067 Arabidopsis lyrata
AL8G22480 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 12515068-12516067 Arabidopsis lyrata
AL8G22480 2.0kb upstream 2.0kb upstream 9357   true scaffold_8: 12505711-12515067 Arabidopsis lyrata
AL8G22480 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 12505711-12507710 Arabidopsis lyrata
AL8G22480 2.0kb downstream 2.0kb downstream 9357   true scaffold_8: 12507711-12517067 Arabidopsis lyrata
AL8G22480 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 12515068-12517067 Arabidopsis lyrata
AL8G22480 5.0kb upstream 5.0kb upstream 12357   true scaffold_8: 12502711-12515067 Arabidopsis lyrata
AL8G22480 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 12502711-12507710 Arabidopsis lyrata
AL8G22480 5.0kb downstream 5.0kb downstream 12357   true scaffold_8: 12507711-12520067 Arabidopsis lyrata
AL8G22480 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 12515068-12520067 Arabidopsis lyrata
AL8G22480 10.0kb upstream 10.0kb upstream 17357   true scaffold_8: 12497711-12515067 Arabidopsis lyrata
AL8G22480 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 12497711-12507710 Arabidopsis lyrata
AL8G22480 10.0kb downstream 10.0kb downstream 17357   true scaffold_8: 12507711-12525067 Arabidopsis lyrata
AL8G22480 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 12515068-12525067 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372614 5261 Brassicaceae View MSA
123831046 5264 Brassicales-Malvales View MSA
124342030 5266 SBM View MSA
124243585 5268 Malvidae View MSA
124061105 5270 Rosid View MSA
123737651 5271 Pentapetalae View MSA
122791193 5272 Eudicot View MSA
122043849 5273 Angiosperm View MSA
121347383 5274 Embryophyte View MSA
123427406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain