Gene : AL8G16240 A. lyrata v2.1

Defline:  (1 of 3) PTHR23023:SF83 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA5-RELATED Genomic Order:  565
Name:  ? AL8G16240 Secondary Identifier:  ? PAC:35948407

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWYDQC-4 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G16240 0.5kb upstream 0.5kb upstream 2232   true scaffold_8: 3884467-3886698 Arabidopsis lyrata
AL8G16240 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 3884467-3884966 Arabidopsis lyrata
AL8G16240 0.5kb downstream 0.5kb downstream 2232   true scaffold_8: 3884967-3887198 Arabidopsis lyrata
AL8G16240 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 3886699-3887198 Arabidopsis lyrata
AL8G16240 1.0kb upstream 1.0kb upstream 2732   true scaffold_8: 3883967-3886698 Arabidopsis lyrata
AL8G16240 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 3883967-3884966 Arabidopsis lyrata
AL8G16240 1.0kb downstream 1.0kb downstream 2732   true scaffold_8: 3884967-3887698 Arabidopsis lyrata
AL8G16240 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 3886699-3887698 Arabidopsis lyrata
AL8G16240 2.0kb upstream 2.0kb upstream 3732   true scaffold_8: 3882967-3886698 Arabidopsis lyrata
AL8G16240 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 3882967-3884966 Arabidopsis lyrata
AL8G16240 2.0kb downstream 2.0kb downstream 3732   true scaffold_8: 3884967-3888698 Arabidopsis lyrata
AL8G16240 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 3886699-3888698 Arabidopsis lyrata
AL8G16240 5.0kb upstream 5.0kb upstream 6732   true scaffold_8: 3879967-3886698 Arabidopsis lyrata
AL8G16240 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 3879967-3884966 Arabidopsis lyrata
AL8G16240 5.0kb downstream 5.0kb downstream 6732   true scaffold_8: 3884967-3891698 Arabidopsis lyrata
AL8G16240 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 3886699-3891698 Arabidopsis lyrata
AL8G16240 10.0kb upstream 10.0kb upstream 11732   true scaffold_8: 3874967-3886698 Arabidopsis lyrata
AL8G16240 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 3874967-3884966 Arabidopsis lyrata
AL8G16240 10.0kb downstream 10.0kb downstream 11732   true scaffold_8: 3884967-3896698 Arabidopsis lyrata
AL8G16240 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 3886699-3896698 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365671 5261 Brassicaceae View MSA
123799011 5264 Brassicales-Malvales View MSA
124296578 5266 SBM View MSA
124244542 5268 Malvidae View MSA
124062448 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain