Gene : AL8G16170 A. lyrata v2.1

Defline:  (1 of 1) 1.1.1.284 - S-(hydroxymethyl)glutathione dehydrogenase / NAD-linked formaldehyde dehydrogenase Genomic Order:  558
Name:  ? AL8G16170 Secondary Identifier:  ? PAC:35950329

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1801 Arabidopsis lyrata pathologic  
Alyrata PWY-5486 Arabidopsis lyrata pathologic  
Alyrata PWY-5751 Arabidopsis lyrata pathologic  
Alyrata PWY-6333 Arabidopsis lyrata pathologic  
Alyrata PWY66-21 Arabidopsis lyrata pathologic  
Alyrata PWY66-389 Arabidopsis lyrata pathologic  
Alyrata PWY-6802 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G16170 0.5kb upstream 0.5kb upstream 2945   true scaffold_8: 3831288-3834232 Arabidopsis lyrata
AL8G16170 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 3833733-3834232 Arabidopsis lyrata
AL8G16170 0.5kb downstream 0.5kb downstream 2945   true scaffold_8: 3830788-3833732 Arabidopsis lyrata
AL8G16170 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 3830788-3831287 Arabidopsis lyrata
AL8G16170 1.0kb upstream 1.0kb upstream 3445   true scaffold_8: 3831288-3834732 Arabidopsis lyrata
AL8G16170 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 3833733-3834732 Arabidopsis lyrata
AL8G16170 1.0kb downstream 1.0kb downstream 3445   true scaffold_8: 3830288-3833732 Arabidopsis lyrata
AL8G16170 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 3830288-3831287 Arabidopsis lyrata
AL8G16170 2.0kb upstream 2.0kb upstream 4445   true scaffold_8: 3831288-3835732 Arabidopsis lyrata
AL8G16170 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 3833733-3835732 Arabidopsis lyrata
AL8G16170 2.0kb downstream 2.0kb downstream 4445   true scaffold_8: 3829288-3833732 Arabidopsis lyrata
AL8G16170 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 3829288-3831287 Arabidopsis lyrata
AL8G16170 5.0kb upstream 5.0kb upstream 7445   true scaffold_8: 3831288-3838732 Arabidopsis lyrata
AL8G16170 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 3833733-3838732 Arabidopsis lyrata
AL8G16170 5.0kb downstream 5.0kb downstream 7445   true scaffold_8: 3826288-3833732 Arabidopsis lyrata
AL8G16170 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 3826288-3831287 Arabidopsis lyrata
AL8G16170 10.0kb upstream 10.0kb upstream 12445   true scaffold_8: 3831288-3843732 Arabidopsis lyrata
AL8G16170 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 3833733-3843732 Arabidopsis lyrata
AL8G16170 10.0kb downstream 10.0kb downstream 12445   true scaffold_8: 3821288-3833732 Arabidopsis lyrata
AL8G16170 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 3821288-3831287 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367475 5261 Brassicaceae View MSA
123831887 5264 Brassicales-Malvales View MSA
124337937 5266 SBM View MSA
124251337 5268 Malvidae View MSA
124074048 5270 Rosid View MSA
123750363 5271 Pentapetalae View MSA
122796866 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain