Gene : AL8G33080 A. lyrata v2.1
Defline:  (1 of 138) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  2062
Name:  ? AL8G33080 Secondary Identifier:  ? PAC:35949567
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G33080 0.5kb upstream 0.5kb upstream 3213   true scaffold_8: 17943028-17946240 Arabidopsis lyrata
AL8G33080 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 17943028-17943527 Arabidopsis lyrata
AL8G33080 0.5kb downstream 0.5kb downstream 3213   true scaffold_8: 17943528-17946740 Arabidopsis lyrata
AL8G33080 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 17946241-17946740 Arabidopsis lyrata
AL8G33080 1.0kb upstream 1.0kb upstream 3713   true scaffold_8: 17942528-17946240 Arabidopsis lyrata
AL8G33080 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 17942528-17943527 Arabidopsis lyrata
AL8G33080 1.0kb downstream 1.0kb downstream 3713   true scaffold_8: 17943528-17947240 Arabidopsis lyrata
AL8G33080 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 17946241-17947240 Arabidopsis lyrata
AL8G33080 2.0kb upstream 2.0kb upstream 4713   true scaffold_8: 17941528-17946240 Arabidopsis lyrata
AL8G33080 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 17941528-17943527 Arabidopsis lyrata
AL8G33080 2.0kb downstream 2.0kb downstream 4713   true scaffold_8: 17943528-17948240 Arabidopsis lyrata
AL8G33080 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 17946241-17948240 Arabidopsis lyrata
AL8G33080 5.0kb upstream 5.0kb upstream 7713   true scaffold_8: 17938528-17946240 Arabidopsis lyrata
AL8G33080 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 17938528-17943527 Arabidopsis lyrata
AL8G33080 5.0kb downstream 5.0kb downstream 7713   true scaffold_8: 17943528-17951240 Arabidopsis lyrata
AL8G33080 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 17946241-17951240 Arabidopsis lyrata
AL8G33080 10.0kb upstream 10.0kb upstream 12713   true scaffold_8: 17933528-17946240 Arabidopsis lyrata
AL8G33080 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 17933528-17943527 Arabidopsis lyrata
AL8G33080 10.0kb downstream 10.0kb downstream 12713   true scaffold_8: 17943528-17956240 Arabidopsis lyrata
AL8G33080 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 17946241-17956240 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371169 5261 Brassicaceae View MSA
123837199 5264 Brassicales-Malvales View MSA
124350275 5266 SBM View MSA
124242382 5268 Malvidae View MSA
124067726 5270 Rosid View MSA
123740187 5271 Pentapetalae View MSA
122797618 5272 Eudicot View MSA
122050016 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain