Gene : AL8G32600 A. lyrata v2.1

Defline:  (1 of 1) PTHR23416:SF2 - SERINE ACETYLTRANSFERASE 5 Genomic Order:  2016
Name:  ? AL8G32600 Secondary Identifier:  ? PAC:35950897

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata CYSTSYN-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-6936 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G32600 0.5kb upstream 0.5kb upstream 1921   true scaffold_8: 17693760-17695680 Arabidopsis lyrata
AL8G32600 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 17695181-17695680 Arabidopsis lyrata
AL8G32600 0.5kb downstream 0.5kb downstream 1921   true scaffold_8: 17693260-17695180 Arabidopsis lyrata
AL8G32600 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 17693260-17693759 Arabidopsis lyrata
AL8G32600 1.0kb upstream 1.0kb upstream 2421   true scaffold_8: 17693760-17696180 Arabidopsis lyrata
AL8G32600 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 17695181-17696180 Arabidopsis lyrata
AL8G32600 1.0kb downstream 1.0kb downstream 2421   true scaffold_8: 17692760-17695180 Arabidopsis lyrata
AL8G32600 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 17692760-17693759 Arabidopsis lyrata
AL8G32600 2.0kb upstream 2.0kb upstream 3421   true scaffold_8: 17693760-17697180 Arabidopsis lyrata
AL8G32600 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 17695181-17697180 Arabidopsis lyrata
AL8G32600 2.0kb downstream 2.0kb downstream 3421   true scaffold_8: 17691760-17695180 Arabidopsis lyrata
AL8G32600 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 17691760-17693759 Arabidopsis lyrata
AL8G32600 5.0kb upstream 5.0kb upstream 6421   true scaffold_8: 17693760-17700180 Arabidopsis lyrata
AL8G32600 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 17695181-17700180 Arabidopsis lyrata
AL8G32600 5.0kb downstream 5.0kb downstream 6421   true scaffold_8: 17688760-17695180 Arabidopsis lyrata
AL8G32600 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 17688760-17693759 Arabidopsis lyrata
AL8G32600 10.0kb upstream 10.0kb upstream 11421   true scaffold_8: 17693760-17705180 Arabidopsis lyrata
AL8G32600 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 17695181-17705180 Arabidopsis lyrata
AL8G32600 10.0kb downstream 10.0kb downstream 11421   true scaffold_8: 17683760-17695180 Arabidopsis lyrata
AL8G32600 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 17683760-17693759 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368813 5261 Brassicaceae View MSA
123828462 5264 Brassicales-Malvales View MSA
124338589 5266 SBM View MSA
124250792 5268 Malvidae View MSA
124068098 5270 Rosid View MSA
123738273 5271 Pentapetalae View MSA
122789751 5272 Eudicot View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain