Gene : AL8G45340 A. lyrata v2.1

Defline:  (1 of 3) K02641 - ferredoxin--NADP+ reductase (petH) Genomic Order:  3212
Name:  ? AL8G45340 Secondary Identifier:  ? PAC:35950747

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PHOTOALL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-101 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G45340 0.5kb upstream 0.5kb upstream 2550   true scaffold_8: 22840161-22842710 Arabidopsis lyrata
AL8G45340 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 22840161-22840660 Arabidopsis lyrata
AL8G45340 0.5kb downstream 0.5kb downstream 2550   true scaffold_8: 22840661-22843210 Arabidopsis lyrata
AL8G45340 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 22842711-22843210 Arabidopsis lyrata
AL8G45340 1.0kb upstream 1.0kb upstream 3050   true scaffold_8: 22839661-22842710 Arabidopsis lyrata
AL8G45340 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 22839661-22840660 Arabidopsis lyrata
AL8G45340 1.0kb downstream 1.0kb downstream 3050   true scaffold_8: 22840661-22843710 Arabidopsis lyrata
AL8G45340 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 22842711-22843710 Arabidopsis lyrata
AL8G45340 2.0kb upstream 2.0kb upstream 4050   true scaffold_8: 22838661-22842710 Arabidopsis lyrata
AL8G45340 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 22838661-22840660 Arabidopsis lyrata
AL8G45340 2.0kb downstream 2.0kb downstream 4050   true scaffold_8: 22840661-22844710 Arabidopsis lyrata
AL8G45340 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 22842711-22844710 Arabidopsis lyrata
AL8G45340 5.0kb upstream 5.0kb upstream 7050   true scaffold_8: 22835661-22842710 Arabidopsis lyrata
AL8G45340 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 22835661-22840660 Arabidopsis lyrata
AL8G45340 5.0kb downstream 5.0kb downstream 7050   true scaffold_8: 22840661-22847710 Arabidopsis lyrata
AL8G45340 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 22842711-22847710 Arabidopsis lyrata
AL8G45340 10.0kb upstream 10.0kb upstream 12050   true scaffold_8: 22830661-22842710 Arabidopsis lyrata
AL8G45340 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 22830661-22840660 Arabidopsis lyrata
AL8G45340 10.0kb downstream 10.0kb downstream 12050   true scaffold_8: 22840661-22852710 Arabidopsis lyrata
AL8G45340 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 22842711-22852710 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371339 5261 Brassicaceae View MSA
123832718 5264 Brassicales-Malvales View MSA
124346878 5266 SBM View MSA
124237795 5268 Malvidae View MSA
124067432 5270 Rosid View MSA
123738149 5271 Pentapetalae View MSA
122792812 5272 Eudicot View MSA
122047092 5273 Angiosperm View MSA
121345417 5274 Embryophyte View MSA
123380214 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain