Gene : AL8G45700 A. lyrata v2.1

Defline:  (1 of 7) K05605 - 3-hydroxyisobutyryl-CoA hydrolase (HIBCH) Genomic Order:  3244
Name:  ? AL8G45700 Secondary Identifier:  ? PAC:35949234

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7574 Arabidopsis lyrata pathologic  
Alyrata VALDEG-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G45700 0.5kb upstream 0.5kb upstream 3503   true scaffold_8: 22938281-22941783 Arabidopsis lyrata
AL8G45700 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 22938281-22938780 Arabidopsis lyrata
AL8G45700 0.5kb downstream 0.5kb downstream 3503   true scaffold_8: 22938781-22942283 Arabidopsis lyrata
AL8G45700 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 22941784-22942283 Arabidopsis lyrata
AL8G45700 1.0kb upstream 1.0kb upstream 4003   true scaffold_8: 22937781-22941783 Arabidopsis lyrata
AL8G45700 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 22937781-22938780 Arabidopsis lyrata
AL8G45700 1.0kb downstream 1.0kb downstream 4003   true scaffold_8: 22938781-22942783 Arabidopsis lyrata
AL8G45700 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 22941784-22942783 Arabidopsis lyrata
AL8G45700 2.0kb upstream 2.0kb upstream 5003   true scaffold_8: 22936781-22941783 Arabidopsis lyrata
AL8G45700 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 22936781-22938780 Arabidopsis lyrata
AL8G45700 2.0kb downstream 2.0kb downstream 5003   true scaffold_8: 22938781-22943783 Arabidopsis lyrata
AL8G45700 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 22941784-22943783 Arabidopsis lyrata
AL8G45700 5.0kb upstream 5.0kb upstream 8003   true scaffold_8: 22933781-22941783 Arabidopsis lyrata
AL8G45700 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 22933781-22938780 Arabidopsis lyrata
AL8G45700 5.0kb downstream 5.0kb downstream 8003   true scaffold_8: 22938781-22946783 Arabidopsis lyrata
AL8G45700 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 22941784-22946783 Arabidopsis lyrata
AL8G45700 10.0kb upstream 10.0kb upstream 13003   true scaffold_8: 22928781-22941783 Arabidopsis lyrata
AL8G45700 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 22928781-22938780 Arabidopsis lyrata
AL8G45700 10.0kb downstream 10.0kb downstream 12513   true scaffold_8: 22938781-22951293 Arabidopsis lyrata
AL8G45700 10.0kb downstream 10.0kb downstream 9510   false scaffold_8: 22941784-22951293 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369641 5261 Brassicaceae View MSA
123838723 5264 Brassicales-Malvales View MSA
124343848 5266 SBM View MSA
124242681 5268 Malvidae View MSA
124073878 5270 Rosid View MSA
123743362 5271 Pentapetalae View MSA
122792177 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain