Gene : AL8G43990 A. lyrata v2.1

Defline:  (1 of 1) PTHR23315:SF7 - U-BOX DOMAIN-CONTAINING PROTEIN 2-RELATED Genomic Order:  3083
Name:  ? AL8G43990 Secondary Identifier:  ? PAC:35950354

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G43990 0.5kb upstream 0.5kb upstream 3755   true scaffold_8: 22365266-22369020 Arabidopsis lyrata
AL8G43990 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 22368521-22369020 Arabidopsis lyrata
AL8G43990 0.5kb downstream 0.5kb downstream 3755   true scaffold_8: 22364766-22368520 Arabidopsis lyrata
AL8G43990 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 22364766-22365265 Arabidopsis lyrata
AL8G43990 1.0kb upstream 1.0kb upstream 4255   true scaffold_8: 22365266-22369520 Arabidopsis lyrata
AL8G43990 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 22368521-22369520 Arabidopsis lyrata
AL8G43990 1.0kb downstream 1.0kb downstream 4255   true scaffold_8: 22364266-22368520 Arabidopsis lyrata
AL8G43990 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 22364266-22365265 Arabidopsis lyrata
AL8G43990 2.0kb upstream 2.0kb upstream 5255   true scaffold_8: 22365266-22370520 Arabidopsis lyrata
AL8G43990 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 22368521-22370520 Arabidopsis lyrata
AL8G43990 2.0kb downstream 2.0kb downstream 5255   true scaffold_8: 22363266-22368520 Arabidopsis lyrata
AL8G43990 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 22363266-22365265 Arabidopsis lyrata
AL8G43990 5.0kb upstream 5.0kb upstream 8255   true scaffold_8: 22365266-22373520 Arabidopsis lyrata
AL8G43990 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 22368521-22373520 Arabidopsis lyrata
AL8G43990 5.0kb downstream 5.0kb downstream 8255   true scaffold_8: 22360266-22368520 Arabidopsis lyrata
AL8G43990 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 22360266-22365265 Arabidopsis lyrata
AL8G43990 10.0kb upstream 10.0kb upstream 13255   true scaffold_8: 22365266-22378520 Arabidopsis lyrata
AL8G43990 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 22368521-22378520 Arabidopsis lyrata
AL8G43990 10.0kb downstream 10.0kb downstream 13255   true scaffold_8: 22355266-22368520 Arabidopsis lyrata
AL8G43990 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 22355266-22365265 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365114 5261 Brassicaceae View MSA
123798893 5264 Brassicales-Malvales View MSA
124296469 5266 SBM View MSA
124250310 5268 Malvidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain