Gene : AL8G44110 A. lyrata v2.1

Defline:  (1 of 2) PTHR10896:SF17 - BETA-1,4-XYLOSYLTRANSFERASE IRX14-RELATED Genomic Order:  3095
Name:  ? AL8G44110 Secondary Identifier:  ? PAC:35949636

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5800 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G44110 0.5kb upstream 0.5kb upstream 2463   true scaffold_8: 22411558-22414020 Arabidopsis lyrata
AL8G44110 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 22413521-22414020 Arabidopsis lyrata
AL8G44110 0.5kb downstream 0.5kb downstream 2463   true scaffold_8: 22411058-22413520 Arabidopsis lyrata
AL8G44110 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 22411058-22411557 Arabidopsis lyrata
AL8G44110 1.0kb upstream 1.0kb upstream 2963   true scaffold_8: 22411558-22414520 Arabidopsis lyrata
AL8G44110 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 22413521-22414520 Arabidopsis lyrata
AL8G44110 1.0kb downstream 1.0kb downstream 2963   true scaffold_8: 22410558-22413520 Arabidopsis lyrata
AL8G44110 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 22410558-22411557 Arabidopsis lyrata
AL8G44110 2.0kb upstream 2.0kb upstream 3963   true scaffold_8: 22411558-22415520 Arabidopsis lyrata
AL8G44110 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 22413521-22415520 Arabidopsis lyrata
AL8G44110 2.0kb downstream 2.0kb downstream 3963   true scaffold_8: 22409558-22413520 Arabidopsis lyrata
AL8G44110 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 22409558-22411557 Arabidopsis lyrata
AL8G44110 5.0kb upstream 5.0kb upstream 6963   true scaffold_8: 22411558-22418520 Arabidopsis lyrata
AL8G44110 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 22413521-22418520 Arabidopsis lyrata
AL8G44110 5.0kb downstream 5.0kb downstream 6963   true scaffold_8: 22406558-22413520 Arabidopsis lyrata
AL8G44110 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 22406558-22411557 Arabidopsis lyrata
AL8G44110 10.0kb upstream 10.0kb upstream 11963   true scaffold_8: 22411558-22423520 Arabidopsis lyrata
AL8G44110 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 22413521-22423520 Arabidopsis lyrata
AL8G44110 10.0kb downstream 10.0kb downstream 11963   true scaffold_8: 22401558-22413520 Arabidopsis lyrata
AL8G44110 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 22401558-22411557 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041384 5273 Angiosperm View MSA
122366648 5261 Brassicaceae View MSA
123840009 5264 Brassicales-Malvales View MSA
124337936 5266 SBM View MSA
124241535 5268 Malvidae View MSA
124066029 5270 Rosid View MSA
123737943 5271 Pentapetalae View MSA
122790258 5272 Eudicot View MSA
121350855 5274 Embryophyte View MSA
123381907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain