Gene : AL8G43520 A. lyrata v2.1

Defline:  (1 of 4) PTHR11751:SF431 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4-RELATED Genomic Order:  3036
Name:  ? AL8G43520 Secondary Identifier:  ? PAC:35950940

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ETHYL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-7270 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G43520 0.5kb upstream 0.5kb upstream 2572   true scaffold_8: 22166361-22168932 Arabidopsis lyrata
AL8G43520 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 22168433-22168932 Arabidopsis lyrata
AL8G43520 0.5kb downstream 0.5kb downstream 2572   true scaffold_8: 22165861-22168432 Arabidopsis lyrata
AL8G43520 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 22165861-22166360 Arabidopsis lyrata
AL8G43520 1.0kb upstream 1.0kb upstream 3072   true scaffold_8: 22166361-22169432 Arabidopsis lyrata
AL8G43520 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 22168433-22169432 Arabidopsis lyrata
AL8G43520 1.0kb downstream 1.0kb downstream 3072   true scaffold_8: 22165361-22168432 Arabidopsis lyrata
AL8G43520 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 22165361-22166360 Arabidopsis lyrata
AL8G43520 2.0kb upstream 2.0kb upstream 4072   true scaffold_8: 22166361-22170432 Arabidopsis lyrata
AL8G43520 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 22168433-22170432 Arabidopsis lyrata
AL8G43520 2.0kb downstream 2.0kb downstream 4072   true scaffold_8: 22164361-22168432 Arabidopsis lyrata
AL8G43520 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 22164361-22166360 Arabidopsis lyrata
AL8G43520 5.0kb upstream 5.0kb upstream 7072   true scaffold_8: 22166361-22173432 Arabidopsis lyrata
AL8G43520 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 22168433-22173432 Arabidopsis lyrata
AL8G43520 5.0kb downstream 5.0kb downstream 7072   true scaffold_8: 22161361-22168432 Arabidopsis lyrata
AL8G43520 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 22161361-22166360 Arabidopsis lyrata
AL8G43520 10.0kb upstream 10.0kb upstream 12072   true scaffold_8: 22166361-22178432 Arabidopsis lyrata
AL8G43520 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 22168433-22178432 Arabidopsis lyrata
AL8G43520 10.0kb downstream 10.0kb downstream 12072   true scaffold_8: 22156361-22168432 Arabidopsis lyrata
AL8G43520 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 22156361-22166360 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370543 5261 Brassicaceae View MSA
123799982 5264 Brassicales-Malvales View MSA
124297448 5266 SBM View MSA
124149337 5268 Malvidae View MSA
124066319 5270 Rosid View MSA
123745403 5271 Pentapetalae View MSA
122791160 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain