Gene : AL8G44800 A. lyrata v2.1

Defline:  (1 of 1) K12670 - oligosaccharyltransferase complex subunit beta (WBP1) Genomic Order:  3160
Name:  ? AL8G44800 Secondary Identifier:  ? PAC:35948766

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G44800 0.5kb upstream 0.5kb upstream 3565   true scaffold_8: 22669862-22673426 Arabidopsis lyrata
AL8G44800 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 22669862-22670361 Arabidopsis lyrata
AL8G44800 0.5kb downstream 0.5kb downstream 3565   true scaffold_8: 22670362-22673926 Arabidopsis lyrata
AL8G44800 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 22673427-22673926 Arabidopsis lyrata
AL8G44800 1.0kb upstream 1.0kb upstream 4065   true scaffold_8: 22669362-22673426 Arabidopsis lyrata
AL8G44800 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 22669362-22670361 Arabidopsis lyrata
AL8G44800 1.0kb downstream 1.0kb downstream 4065   true scaffold_8: 22670362-22674426 Arabidopsis lyrata
AL8G44800 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 22673427-22674426 Arabidopsis lyrata
AL8G44800 2.0kb upstream 2.0kb upstream 5065   true scaffold_8: 22668362-22673426 Arabidopsis lyrata
AL8G44800 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 22668362-22670361 Arabidopsis lyrata
AL8G44800 2.0kb downstream 2.0kb downstream 5065   true scaffold_8: 22670362-22675426 Arabidopsis lyrata
AL8G44800 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 22673427-22675426 Arabidopsis lyrata
AL8G44800 5.0kb upstream 5.0kb upstream 8065   true scaffold_8: 22665362-22673426 Arabidopsis lyrata
AL8G44800 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 22665362-22670361 Arabidopsis lyrata
AL8G44800 5.0kb downstream 5.0kb downstream 8065   true scaffold_8: 22670362-22678426 Arabidopsis lyrata
AL8G44800 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 22673427-22678426 Arabidopsis lyrata
AL8G44800 10.0kb upstream 10.0kb upstream 13065   true scaffold_8: 22660362-22673426 Arabidopsis lyrata
AL8G44800 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 22660362-22670361 Arabidopsis lyrata
AL8G44800 10.0kb downstream 10.0kb downstream 13065   true scaffold_8: 22670362-22683426 Arabidopsis lyrata
AL8G44800 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 22673427-22683426 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360352 5261 Brassicaceae View MSA
123840413 5264 Brassicales-Malvales View MSA
124344226 5266 SBM View MSA
124247082 5268 Malvidae View MSA
124068275 5270 Rosid View MSA
123750728 5271 Pentapetalae View MSA
122793398 5272 Eudicot View MSA
122043093 5273 Angiosperm View MSA
121346216 5274 Embryophyte View MSA
123424757 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain