Gene : AL8G42070 A. lyrata v2.1

Defline:  (1 of 3) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2903
Name:  ? AL8G42070 Secondary Identifier:  ? PAC:35948876

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G42070 0.5kb upstream 0.5kb upstream 1960   true scaffold_8: 21597939-21599898 Arabidopsis lyrata
AL8G42070 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 21599399-21599898 Arabidopsis lyrata
AL8G42070 0.5kb downstream 0.5kb downstream 1960   true scaffold_8: 21597439-21599398 Arabidopsis lyrata
AL8G42070 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 21597439-21597938 Arabidopsis lyrata
AL8G42070 1.0kb upstream 1.0kb upstream 2460   true scaffold_8: 21597939-21600398 Arabidopsis lyrata
AL8G42070 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 21599399-21600398 Arabidopsis lyrata
AL8G42070 1.0kb downstream 1.0kb downstream 2460   true scaffold_8: 21596939-21599398 Arabidopsis lyrata
AL8G42070 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 21596939-21597938 Arabidopsis lyrata
AL8G42070 2.0kb upstream 2.0kb upstream 3460   true scaffold_8: 21597939-21601398 Arabidopsis lyrata
AL8G42070 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 21599399-21601398 Arabidopsis lyrata
AL8G42070 2.0kb downstream 2.0kb downstream 3460   true scaffold_8: 21595939-21599398 Arabidopsis lyrata
AL8G42070 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 21595939-21597938 Arabidopsis lyrata
AL8G42070 5.0kb upstream 5.0kb upstream 6460   true scaffold_8: 21597939-21604398 Arabidopsis lyrata
AL8G42070 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 21599399-21604398 Arabidopsis lyrata
AL8G42070 5.0kb downstream 5.0kb downstream 6460   true scaffold_8: 21592939-21599398 Arabidopsis lyrata
AL8G42070 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 21592939-21597938 Arabidopsis lyrata
AL8G42070 10.0kb upstream 10.0kb upstream 11460   true scaffold_8: 21597939-21609398 Arabidopsis lyrata
AL8G42070 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 21599399-21609398 Arabidopsis lyrata
AL8G42070 10.0kb downstream 10.0kb downstream 11460   true scaffold_8: 21587939-21599398 Arabidopsis lyrata
AL8G42070 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 21587939-21597938 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381582 5261 Brassicaceae View MSA
123833487 5264 Brassicales-Malvales View MSA
124351138 5266 SBM View MSA
124239746 5268 Malvidae View MSA
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain