Gene : AL8G42200 A. lyrata v2.1

Defline:  (1 of 4) 2.4.1.29 - Cellulose synthase (GDP-forming) / GDP-glucose-cellulose glucosyltransferase Genomic Order:  2915
Name:  ? AL8G42200 Secondary Identifier:  ? PAC:35950370

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1001 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G42200 0.5kb upstream 0.5kb upstream 5969   true scaffold_8: 21646395-21652363 Arabidopsis lyrata
AL8G42200 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 21646395-21646894 Arabidopsis lyrata
AL8G42200 0.5kb downstream 0.5kb downstream 5969   true scaffold_8: 21646895-21652863 Arabidopsis lyrata
AL8G42200 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 21652364-21652863 Arabidopsis lyrata
AL8G42200 1.0kb upstream 1.0kb upstream 6469   true scaffold_8: 21645895-21652363 Arabidopsis lyrata
AL8G42200 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 21645895-21646894 Arabidopsis lyrata
AL8G42200 1.0kb downstream 1.0kb downstream 6469   true scaffold_8: 21646895-21653363 Arabidopsis lyrata
AL8G42200 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 21652364-21653363 Arabidopsis lyrata
AL8G42200 2.0kb upstream 2.0kb upstream 7469   true scaffold_8: 21644895-21652363 Arabidopsis lyrata
AL8G42200 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 21644895-21646894 Arabidopsis lyrata
AL8G42200 2.0kb downstream 2.0kb downstream 7469   true scaffold_8: 21646895-21654363 Arabidopsis lyrata
AL8G42200 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 21652364-21654363 Arabidopsis lyrata
AL8G42200 5.0kb upstream 5.0kb upstream 10469   true scaffold_8: 21641895-21652363 Arabidopsis lyrata
AL8G42200 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 21641895-21646894 Arabidopsis lyrata
AL8G42200 5.0kb downstream 5.0kb downstream 10469   true scaffold_8: 21646895-21657363 Arabidopsis lyrata
AL8G42200 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 21652364-21657363 Arabidopsis lyrata
AL8G42200 10.0kb upstream 10.0kb upstream 15469   true scaffold_8: 21636895-21652363 Arabidopsis lyrata
AL8G42200 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 21636895-21646894 Arabidopsis lyrata
AL8G42200 10.0kb downstream 10.0kb downstream 15469   true scaffold_8: 21646895-21662363 Arabidopsis lyrata
AL8G42200 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 21652364-21662363 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365550 5261 Brassicaceae View MSA
123839580 5264 Brassicales-Malvales View MSA
124351037 5266 SBM View MSA
124248532 5268 Malvidae View MSA
124071949 5270 Rosid View MSA
123747849 5271 Pentapetalae View MSA
122795199 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain