Gene : AL8G41120 A. lyrata v2.1

Defline:  (1 of 1) 1.1.1.23 - Histidinol dehydrogenase Genomic Order:  2815
Name:  ? AL8G41120 Secondary Identifier:  ? PAC:35949631

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata HISTSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G41120 0.5kb upstream 0.5kb upstream 3281   true scaffold_8: 21188731-21192011 Arabidopsis lyrata
AL8G41120 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 21191512-21192011 Arabidopsis lyrata
AL8G41120 0.5kb downstream 0.5kb downstream 3281   true scaffold_8: 21188231-21191511 Arabidopsis lyrata
AL8G41120 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 21188231-21188730 Arabidopsis lyrata
AL8G41120 1.0kb upstream 1.0kb upstream 3781   true scaffold_8: 21188731-21192511 Arabidopsis lyrata
AL8G41120 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 21191512-21192511 Arabidopsis lyrata
AL8G41120 1.0kb downstream 1.0kb downstream 3781   true scaffold_8: 21187731-21191511 Arabidopsis lyrata
AL8G41120 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 21187731-21188730 Arabidopsis lyrata
AL8G41120 2.0kb upstream 2.0kb upstream 4781   true scaffold_8: 21188731-21193511 Arabidopsis lyrata
AL8G41120 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 21191512-21193511 Arabidopsis lyrata
AL8G41120 2.0kb downstream 2.0kb downstream 4781   true scaffold_8: 21186731-21191511 Arabidopsis lyrata
AL8G41120 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 21186731-21188730 Arabidopsis lyrata
AL8G41120 5.0kb upstream 5.0kb upstream 7781   true scaffold_8: 21188731-21196511 Arabidopsis lyrata
AL8G41120 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 21191512-21196511 Arabidopsis lyrata
AL8G41120 5.0kb downstream 5.0kb downstream 7781   true scaffold_8: 21183731-21191511 Arabidopsis lyrata
AL8G41120 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 21183731-21188730 Arabidopsis lyrata
AL8G41120 10.0kb upstream 10.0kb upstream 12781   true scaffold_8: 21188731-21201511 Arabidopsis lyrata
AL8G41120 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 21191512-21201511 Arabidopsis lyrata
AL8G41120 10.0kb downstream 10.0kb downstream 12781   true scaffold_8: 21178731-21191511 Arabidopsis lyrata
AL8G41120 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 21178731-21188730 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369392 5261 Brassicaceae View MSA
123839930 5264 Brassicales-Malvales View MSA
124340813 5266 SBM View MSA
124241188 5268 Malvidae View MSA
124061664 5270 Rosid View MSA
123738837 5271 Pentapetalae View MSA
122785994 5272 Eudicot View MSA
122046994 5273 Angiosperm View MSA
121351553 5274 Embryophyte View MSA
123424167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain