Gene : AL8G41300 A. lyrata v2.1

Defline:  (1 of 1) K02701 - photosystem I subunit PsaN (psaN) Genomic Order:  2833
Name:  ? AL8G41300 Secondary Identifier:  ? PAC:35950751

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PHOTOALL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-101 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G41300 0.5kb upstream 0.5kb upstream 1545   true scaffold_8: 21276375-21277919 Arabidopsis lyrata
AL8G41300 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 21277420-21277919 Arabidopsis lyrata
AL8G41300 0.5kb downstream 0.5kb downstream 1545   true scaffold_8: 21275875-21277419 Arabidopsis lyrata
AL8G41300 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 21275875-21276374 Arabidopsis lyrata
AL8G41300 1.0kb upstream 1.0kb upstream 2045   true scaffold_8: 21276375-21278419 Arabidopsis lyrata
AL8G41300 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 21277420-21278419 Arabidopsis lyrata
AL8G41300 1.0kb downstream 1.0kb downstream 2045   true scaffold_8: 21275375-21277419 Arabidopsis lyrata
AL8G41300 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 21275375-21276374 Arabidopsis lyrata
AL8G41300 2.0kb upstream 2.0kb upstream 3045   true scaffold_8: 21276375-21279419 Arabidopsis lyrata
AL8G41300 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 21277420-21279419 Arabidopsis lyrata
AL8G41300 2.0kb downstream 2.0kb downstream 3045   true scaffold_8: 21274375-21277419 Arabidopsis lyrata
AL8G41300 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 21274375-21276374 Arabidopsis lyrata
AL8G41300 5.0kb upstream 5.0kb upstream 6045   true scaffold_8: 21276375-21282419 Arabidopsis lyrata
AL8G41300 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 21277420-21282419 Arabidopsis lyrata
AL8G41300 5.0kb downstream 5.0kb downstream 6045   true scaffold_8: 21271375-21277419 Arabidopsis lyrata
AL8G41300 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 21271375-21276374 Arabidopsis lyrata
AL8G41300 10.0kb upstream 10.0kb upstream 11045   true scaffold_8: 21276375-21287419 Arabidopsis lyrata
AL8G41300 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 21277420-21287419 Arabidopsis lyrata
AL8G41300 10.0kb downstream 10.0kb downstream 11045   true scaffold_8: 21266375-21277419 Arabidopsis lyrata
AL8G41300 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 21266375-21276374 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379463 5261 Brassicaceae View MSA
123830230 5264 Brassicales-Malvales View MSA
124345790 5266 SBM View MSA
124247840 5268 Malvidae View MSA
124061914 5270 Rosid View MSA
123739503 5271 Pentapetalae View MSA
122786700 5272 Eudicot View MSA
122046387 5273 Angiosperm View MSA
121346900 5274 Embryophyte View MSA
123425334 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain