Gene : AL8G40060 A. lyrata v2.1

Defline:  (1 of 3) PTHR10168:SF73 - GLUTAREDOXIN-C1 Genomic Order:  2718
Name:  ? AL8G40060 Secondary Identifier:  ? PAC:35950019

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata THIOREDOX-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G40060 0.5kb upstream 0.5kb upstream 2062   true scaffold_8: 20802354-20804415 Arabidopsis lyrata
AL8G40060 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 20803916-20804415 Arabidopsis lyrata
AL8G40060 0.5kb downstream 0.5kb downstream 2062   true scaffold_8: 20801854-20803915 Arabidopsis lyrata
AL8G40060 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 20801854-20802353 Arabidopsis lyrata
AL8G40060 1.0kb upstream 1.0kb upstream 2562   true scaffold_8: 20802354-20804915 Arabidopsis lyrata
AL8G40060 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 20803916-20804915 Arabidopsis lyrata
AL8G40060 1.0kb downstream 1.0kb downstream 2562   true scaffold_8: 20801354-20803915 Arabidopsis lyrata
AL8G40060 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 20801354-20802353 Arabidopsis lyrata
AL8G40060 2.0kb upstream 2.0kb upstream 3562   true scaffold_8: 20802354-20805915 Arabidopsis lyrata
AL8G40060 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 20803916-20805915 Arabidopsis lyrata
AL8G40060 2.0kb downstream 2.0kb downstream 3562   true scaffold_8: 20800354-20803915 Arabidopsis lyrata
AL8G40060 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 20800354-20802353 Arabidopsis lyrata
AL8G40060 5.0kb upstream 5.0kb upstream 6562   true scaffold_8: 20802354-20808915 Arabidopsis lyrata
AL8G40060 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 20803916-20808915 Arabidopsis lyrata
AL8G40060 5.0kb downstream 5.0kb downstream 6562   true scaffold_8: 20797354-20803915 Arabidopsis lyrata
AL8G40060 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 20797354-20802353 Arabidopsis lyrata
AL8G40060 10.0kb upstream 10.0kb upstream 11562   true scaffold_8: 20802354-20813915 Arabidopsis lyrata
AL8G40060 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 20803916-20813915 Arabidopsis lyrata
AL8G40060 10.0kb downstream 10.0kb downstream 11562   true scaffold_8: 20792354-20803915 Arabidopsis lyrata
AL8G40060 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 20792354-20802353 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369652 5261 Brassicaceae View MSA
123840210 5264 Brassicales-Malvales View MSA
124341739 5266 SBM View MSA
124243445 5268 Malvidae View MSA
124060631 5270 Rosid View MSA
123740735 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain