Gene : AL8G38190 A. lyrata v2.1

Defline:  (1 of 2) K08343 - ubiquitin-like-conjugating enzyme ATG3 (ATG3) Genomic Order:  2539
Name:  ? AL8G38190 Secondary Identifier:  ? PAC:35948446

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G38190 0.5kb upstream 0.5kb upstream 3235   true scaffold_8: 20058415-20061649 Arabidopsis lyrata
AL8G38190 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 20061150-20061649 Arabidopsis lyrata
AL8G38190 0.5kb downstream 0.5kb downstream 3235   true scaffold_8: 20057915-20061149 Arabidopsis lyrata
AL8G38190 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 20057915-20058414 Arabidopsis lyrata
AL8G38190 1.0kb upstream 1.0kb upstream 3735   true scaffold_8: 20058415-20062149 Arabidopsis lyrata
AL8G38190 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 20061150-20062149 Arabidopsis lyrata
AL8G38190 1.0kb downstream 1.0kb downstream 3735   true scaffold_8: 20057415-20061149 Arabidopsis lyrata
AL8G38190 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 20057415-20058414 Arabidopsis lyrata
AL8G38190 2.0kb upstream 2.0kb upstream 4735   true scaffold_8: 20058415-20063149 Arabidopsis lyrata
AL8G38190 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 20061150-20063149 Arabidopsis lyrata
AL8G38190 2.0kb downstream 2.0kb downstream 4735   true scaffold_8: 20056415-20061149 Arabidopsis lyrata
AL8G38190 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 20056415-20058414 Arabidopsis lyrata
AL8G38190 5.0kb upstream 5.0kb upstream 7735   true scaffold_8: 20058415-20066149 Arabidopsis lyrata
AL8G38190 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 20061150-20066149 Arabidopsis lyrata
AL8G38190 5.0kb downstream 5.0kb downstream 7735   true scaffold_8: 20053415-20061149 Arabidopsis lyrata
AL8G38190 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 20053415-20058414 Arabidopsis lyrata
AL8G38190 10.0kb upstream 10.0kb upstream 12735   true scaffold_8: 20058415-20071149 Arabidopsis lyrata
AL8G38190 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 20061150-20071149 Arabidopsis lyrata
AL8G38190 10.0kb downstream 10.0kb downstream 12735   true scaffold_8: 20048415-20061149 Arabidopsis lyrata
AL8G38190 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 20048415-20058414 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369043 5261 Brassicaceae View MSA
123831045 5264 Brassicales-Malvales View MSA
124350961 5266 SBM View MSA
124242414 5268 Malvidae View MSA
124064028 5270 Rosid View MSA
123743996 5271 Pentapetalae View MSA
122789041 5272 Eudicot View MSA
122041877 5273 Angiosperm View MSA
121349462 5274 Embryophyte View MSA
123426307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain