Gene : AL1G17720 A. lyrata v2.1

Defline:  (1 of 5) PTHR21717:SF9 - PROTEIN TBF1 Genomic Order:  736
Name:  ? AL1G17720 Secondary Identifier:  ? PAC:35931639

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G17720 0.5kb upstream 0.5kb upstream 3652   true scaffold_1: 2765929-2769580 Arabidopsis lyrata
AL1G17720 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 2769081-2769580 Arabidopsis lyrata
AL1G17720 0.5kb downstream 0.5kb downstream 3652   true scaffold_1: 2765429-2769080 Arabidopsis lyrata
AL1G17720 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 2765429-2765928 Arabidopsis lyrata
AL1G17720 1.0kb upstream 1.0kb upstream 4152   true scaffold_1: 2765929-2770080 Arabidopsis lyrata
AL1G17720 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 2769081-2770080 Arabidopsis lyrata
AL1G17720 1.0kb downstream 1.0kb downstream 4152   true scaffold_1: 2764929-2769080 Arabidopsis lyrata
AL1G17720 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 2764929-2765928 Arabidopsis lyrata
AL1G17720 2.0kb upstream 2.0kb upstream 5152   true scaffold_1: 2765929-2771080 Arabidopsis lyrata
AL1G17720 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 2769081-2771080 Arabidopsis lyrata
AL1G17720 2.0kb downstream 2.0kb downstream 5152   true scaffold_1: 2763929-2769080 Arabidopsis lyrata
AL1G17720 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 2763929-2765928 Arabidopsis lyrata
AL1G17720 5.0kb upstream 5.0kb upstream 8152   true scaffold_1: 2765929-2774080 Arabidopsis lyrata
AL1G17720 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 2769081-2774080 Arabidopsis lyrata
AL1G17720 5.0kb downstream 5.0kb downstream 8152   true scaffold_1: 2760929-2769080 Arabidopsis lyrata
AL1G17720 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 2760929-2765928 Arabidopsis lyrata
AL1G17720 10.0kb upstream 10.0kb upstream 13152   true scaffold_1: 2765929-2779080 Arabidopsis lyrata
AL1G17720 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 2769081-2779080 Arabidopsis lyrata
AL1G17720 10.0kb downstream 10.0kb downstream 13152   true scaffold_1: 2755929-2769080 Arabidopsis lyrata
AL1G17720 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 2755929-2765928 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361541 5261 Brassicaceae View MSA
123839378 5264 Brassicales-Malvales View MSA
124340625 5266 SBM View MSA
124242668 5268 Malvidae View MSA
124063345 5270 Rosid View MSA
123753061 5271 Pentapetalae View MSA
122788041 5272 Eudicot View MSA
122049318 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348439 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain