Gene : AL1G14300 A. lyrata v2.1

Defline:  (1 of 1) 1.17.7.2 - 7-hydroxymethyl chlorophyll a reductase Genomic Order:  413
Name:  ? AL1G14300 Secondary Identifier:  ? PAC:35935656

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5068 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G14300 0.5kb upstream 0.5kb upstream 4913   true scaffold_1: 1549871-1554783 Arabidopsis lyrata
AL1G14300 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 1554284-1554783 Arabidopsis lyrata
AL1G14300 0.5kb downstream 0.5kb downstream 4913   true scaffold_1: 1549371-1554283 Arabidopsis lyrata
AL1G14300 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 1549371-1549870 Arabidopsis lyrata
AL1G14300 1.0kb upstream 1.0kb upstream 5413   true scaffold_1: 1549871-1555283 Arabidopsis lyrata
AL1G14300 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 1554284-1555283 Arabidopsis lyrata
AL1G14300 1.0kb downstream 1.0kb downstream 5413   true scaffold_1: 1548871-1554283 Arabidopsis lyrata
AL1G14300 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 1548871-1549870 Arabidopsis lyrata
AL1G14300 2.0kb upstream 2.0kb upstream 6413   true scaffold_1: 1549871-1556283 Arabidopsis lyrata
AL1G14300 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 1554284-1556283 Arabidopsis lyrata
AL1G14300 2.0kb downstream 2.0kb downstream 6413   true scaffold_1: 1547871-1554283 Arabidopsis lyrata
AL1G14300 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 1547871-1549870 Arabidopsis lyrata
AL1G14300 5.0kb upstream 5.0kb upstream 9413   true scaffold_1: 1549871-1559283 Arabidopsis lyrata
AL1G14300 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 1554284-1559283 Arabidopsis lyrata
AL1G14300 5.0kb downstream 5.0kb downstream 9413   true scaffold_1: 1544871-1554283 Arabidopsis lyrata
AL1G14300 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 1544871-1549870 Arabidopsis lyrata
AL1G14300 10.0kb upstream 10.0kb upstream 14413   true scaffold_1: 1549871-1564283 Arabidopsis lyrata
AL1G14300 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 1554284-1564283 Arabidopsis lyrata
AL1G14300 10.0kb downstream 10.0kb downstream 14413   true scaffold_1: 1539871-1554283 Arabidopsis lyrata
AL1G14300 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 1539871-1549870 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371719 5261 Brassicaceae View MSA
123830449 5264 Brassicales-Malvales View MSA
124343484 5266 SBM View MSA
124240416 5268 Malvidae View MSA
124061681 5270 Rosid View MSA
123745545 5271 Pentapetalae View MSA
122786931 5272 Eudicot View MSA
122042244 5273 Angiosperm View MSA
121347616 5274 Embryophyte View MSA
123428400 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain