Gene : AL1G15500 A. lyrata v2.1
Defline:  (1 of 39) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  530
Name:  ? AL1G15500 Secondary Identifier:  ? PAC:35934285
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G15500 0.5kb upstream 0.5kb upstream 2483   true scaffold_1: 2002648-2005130 Arabidopsis lyrata
AL1G15500 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 2002648-2003147 Arabidopsis lyrata
AL1G15500 0.5kb downstream 0.5kb downstream 2483   true scaffold_1: 2003148-2005630 Arabidopsis lyrata
AL1G15500 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 2005131-2005630 Arabidopsis lyrata
AL1G15500 1.0kb upstream 1.0kb upstream 2983   true scaffold_1: 2002148-2005130 Arabidopsis lyrata
AL1G15500 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 2002148-2003147 Arabidopsis lyrata
AL1G15500 1.0kb downstream 1.0kb downstream 2983   true scaffold_1: 2003148-2006130 Arabidopsis lyrata
AL1G15500 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 2005131-2006130 Arabidopsis lyrata
AL1G15500 2.0kb upstream 2.0kb upstream 3983   true scaffold_1: 2001148-2005130 Arabidopsis lyrata
AL1G15500 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 2001148-2003147 Arabidopsis lyrata
AL1G15500 2.0kb downstream 2.0kb downstream 3983   true scaffold_1: 2003148-2007130 Arabidopsis lyrata
AL1G15500 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 2005131-2007130 Arabidopsis lyrata
AL1G15500 5.0kb upstream 5.0kb upstream 6983   true scaffold_1: 1998148-2005130 Arabidopsis lyrata
AL1G15500 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 1998148-2003147 Arabidopsis lyrata
AL1G15500 5.0kb downstream 5.0kb downstream 6983   true scaffold_1: 2003148-2010130 Arabidopsis lyrata
AL1G15500 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 2005131-2010130 Arabidopsis lyrata
AL1G15500 10.0kb upstream 10.0kb upstream 11983   true scaffold_1: 1993148-2005130 Arabidopsis lyrata
AL1G15500 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 1993148-2003147 Arabidopsis lyrata
AL1G15500 10.0kb downstream 10.0kb downstream 11983   true scaffold_1: 2003148-2015130 Arabidopsis lyrata
AL1G15500 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 2005131-2015130 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370524 5261 Brassicaceae View MSA
123827733 5264 Brassicales-Malvales View MSA
124336556 5266 SBM View MSA
124240267 5268 Malvidae View MSA
124065853 5270 Rosid View MSA
123740694 5271 Pentapetalae View MSA
122786557 5272 Eudicot View MSA
122042535 5273 Angiosperm View MSA
121309984 5274 Embryophyte View MSA
123347596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain