Gene : AL1G10960 A. lyrata v2.1

Defline:  (1 of 2) KOG0229 - Phosphatidylinositol-4-phosphate 5-kinase Genomic Order:  92
Name:  ? AL1G10960 Secondary Identifier:  ? PAC:35931276

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6351 Arabidopsis lyrata pathologic  
Alyrata PWY-6352 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G10960 0.5kb upstream 0.5kb upstream 3085   true scaffold_1: 324197-327281 Arabidopsis lyrata
AL1G10960 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 326782-327281 Arabidopsis lyrata
AL1G10960 0.5kb downstream 0.5kb downstream 3085   true scaffold_1: 323697-326781 Arabidopsis lyrata
AL1G10960 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 323697-324196 Arabidopsis lyrata
AL1G10960 1.0kb upstream 1.0kb upstream 3585   true scaffold_1: 324197-327781 Arabidopsis lyrata
AL1G10960 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 326782-327781 Arabidopsis lyrata
AL1G10960 1.0kb downstream 1.0kb downstream 3585   true scaffold_1: 323197-326781 Arabidopsis lyrata
AL1G10960 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 323197-324196 Arabidopsis lyrata
AL1G10960 2.0kb upstream 2.0kb upstream 4585   true scaffold_1: 324197-328781 Arabidopsis lyrata
AL1G10960 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 326782-328781 Arabidopsis lyrata
AL1G10960 2.0kb downstream 2.0kb downstream 4585   true scaffold_1: 322197-326781 Arabidopsis lyrata
AL1G10960 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 322197-324196 Arabidopsis lyrata
AL1G10960 5.0kb upstream 5.0kb upstream 7585   true scaffold_1: 324197-331781 Arabidopsis lyrata
AL1G10960 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 326782-331781 Arabidopsis lyrata
AL1G10960 5.0kb downstream 5.0kb downstream 7585   true scaffold_1: 319197-326781 Arabidopsis lyrata
AL1G10960 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 319197-324196 Arabidopsis lyrata
AL1G10960 10.0kb upstream 10.0kb upstream 12585   true scaffold_1: 324197-336781 Arabidopsis lyrata
AL1G10960 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 326782-336781 Arabidopsis lyrata
AL1G10960 10.0kb downstream 10.0kb downstream 12585   true scaffold_1: 314197-326781 Arabidopsis lyrata
AL1G10960 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 314197-324196 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027967 5273 Angiosperm View MSA
122374442 5261 Brassicaceae View MSA
123829576 5264 Brassicales-Malvales View MSA
124321608 5266 SBM View MSA
124250315 5268 Malvidae View MSA
124037204 5270 Rosid View MSA
123741083 5271 Pentapetalae View MSA
122791627 5272 Eudicot View MSA
121349579 5274 Embryophyte View MSA
123428114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain