Gene : AL1G11640 A. lyrata v2.1
Defline:  (1 of 3) K01363 - cathepsin B (CTSB) Genomic Order:  157
Name:  ? AL1G11640 Secondary Identifier:  ? PAC:35935595
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G11640 0.5kb upstream 0.5kb upstream 2836   true scaffold_1: 577777-580612 Arabidopsis lyrata
AL1G11640 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 577777-578276 Arabidopsis lyrata
AL1G11640 0.5kb downstream 0.5kb downstream 2836   true scaffold_1: 578277-581112 Arabidopsis lyrata
AL1G11640 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 580613-581112 Arabidopsis lyrata
AL1G11640 1.0kb upstream 1.0kb upstream 3336   true scaffold_1: 577277-580612 Arabidopsis lyrata
AL1G11640 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 577277-578276 Arabidopsis lyrata
AL1G11640 1.0kb downstream 1.0kb downstream 3336   true scaffold_1: 578277-581612 Arabidopsis lyrata
AL1G11640 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 580613-581612 Arabidopsis lyrata
AL1G11640 2.0kb upstream 2.0kb upstream 4336   true scaffold_1: 576277-580612 Arabidopsis lyrata
AL1G11640 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 576277-578276 Arabidopsis lyrata
AL1G11640 2.0kb downstream 2.0kb downstream 4336   true scaffold_1: 578277-582612 Arabidopsis lyrata
AL1G11640 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 580613-582612 Arabidopsis lyrata
AL1G11640 5.0kb upstream 5.0kb upstream 7336   true scaffold_1: 573277-580612 Arabidopsis lyrata
AL1G11640 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 573277-578276 Arabidopsis lyrata
AL1G11640 5.0kb downstream 5.0kb downstream 7336   true scaffold_1: 578277-585612 Arabidopsis lyrata
AL1G11640 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 580613-585612 Arabidopsis lyrata
AL1G11640 10.0kb upstream 10.0kb upstream 12336   true scaffold_1: 568277-580612 Arabidopsis lyrata
AL1G11640 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 568277-578276 Arabidopsis lyrata
AL1G11640 10.0kb downstream 10.0kb downstream 12336   true scaffold_1: 578277-590612 Arabidopsis lyrata
AL1G11640 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 580613-590612 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366253 5261 Brassicaceae View MSA
123839045 5264 Brassicales-Malvales View MSA
124338175 5266 SBM View MSA
124249605 5268 Malvidae View MSA
124067927 5270 Rosid View MSA
123736413 5271 Pentapetalae View MSA
122793546 5272 Eudicot View MSA
122041719 5273 Angiosperm View MSA
121345003 5274 Embryophyte View MSA
123427014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain