Gene : AL1G29670 A. lyrata v2.1

Defline:  (1 of 5) K00940 - nucleoside-diphosphate kinase (ndk, NME) Genomic Order:  1877
Name:  ? AL1G29670 Secondary Identifier:  ? PAC:35931865

Sequence Feature Displayer

Ontology Annotation Displayer

21 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-162 Arabidopsis lyrata pathologic  
Alyrata PWY-6126 Arabidopsis lyrata pathologic  
Alyrata PWY-6545 Arabidopsis lyrata pathologic  
Alyrata PWY-7176 Arabidopsis lyrata pathologic  
Alyrata PWY-7184 Arabidopsis lyrata pathologic  
Alyrata PWY-7196 Arabidopsis lyrata pathologic  
Alyrata PWY-7197 Arabidopsis lyrata pathologic  
Alyrata PWY-7200 Arabidopsis lyrata pathologic  
Alyrata PWY-7205 Arabidopsis lyrata pathologic  
Alyrata PWY-7208 Arabidopsis lyrata pathologic  
Alyrata PWY-7210 Arabidopsis lyrata pathologic  
Alyrata PWY-7211 Arabidopsis lyrata pathologic  
Alyrata PWY-7220 Arabidopsis lyrata pathologic  
Alyrata PWY-7221 Arabidopsis lyrata pathologic  
Alyrata PWY-7222 Arabidopsis lyrata pathologic  
Alyrata PWY-7224 Arabidopsis lyrata pathologic  
Alyrata PWY-7226 Arabidopsis lyrata pathologic  
Alyrata PWY-7227 Arabidopsis lyrata pathologic  
Alyrata PWY-7228 Arabidopsis lyrata pathologic  
Alyrata PWY-7229 Arabidopsis lyrata pathologic  
Alyrata PWY-841 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G29670 0.5kb upstream 0.5kb upstream 1856   true scaffold_1: 7294241-7296096 Arabidopsis lyrata
AL1G29670 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 7295597-7296096 Arabidopsis lyrata
AL1G29670 0.5kb downstream 0.5kb downstream 1856   true scaffold_1: 7293741-7295596 Arabidopsis lyrata
AL1G29670 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 7293741-7294240 Arabidopsis lyrata
AL1G29670 1.0kb upstream 1.0kb upstream 2356   true scaffold_1: 7294241-7296596 Arabidopsis lyrata
AL1G29670 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 7295597-7296596 Arabidopsis lyrata
AL1G29670 1.0kb downstream 1.0kb downstream 2356   true scaffold_1: 7293241-7295596 Arabidopsis lyrata
AL1G29670 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 7293241-7294240 Arabidopsis lyrata
AL1G29670 2.0kb upstream 2.0kb upstream 3356   true scaffold_1: 7294241-7297596 Arabidopsis lyrata
AL1G29670 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 7295597-7297596 Arabidopsis lyrata
AL1G29670 2.0kb downstream 2.0kb downstream 3356   true scaffold_1: 7292241-7295596 Arabidopsis lyrata
AL1G29670 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 7292241-7294240 Arabidopsis lyrata
AL1G29670 5.0kb upstream 5.0kb upstream 6356   true scaffold_1: 7294241-7300596 Arabidopsis lyrata
AL1G29670 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 7295597-7300596 Arabidopsis lyrata
AL1G29670 5.0kb downstream 5.0kb downstream 6356   true scaffold_1: 7289241-7295596 Arabidopsis lyrata
AL1G29670 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 7289241-7294240 Arabidopsis lyrata
AL1G29670 10.0kb upstream 10.0kb upstream 11356   true scaffold_1: 7294241-7305596 Arabidopsis lyrata
AL1G29670 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 7295597-7305596 Arabidopsis lyrata
AL1G29670 10.0kb downstream 10.0kb downstream 11356   true scaffold_1: 7284241-7295596 Arabidopsis lyrata
AL1G29670 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 7284241-7294240 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374169 5261 Brassicaceae View MSA
123828105 5264 Brassicales-Malvales View MSA
124343949 5266 SBM View MSA
124246800 5268 Malvidae View MSA
124064787 5270 Rosid View MSA
123750208 5271 Pentapetalae View MSA
122791654 5272 Eudicot View MSA
122046358 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121348725 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain