Gene : AL1G22920 A. lyrata v2.1

Defline:  (1 of 1) PTHR10381:SF8 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 6, CHLOROPLASTIC Genomic Order:  1228
Name:  ? AL1G22920 Secondary Identifier:  ? PAC:35930226

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G22920 0.5kb upstream 0.5kb upstream 2733   true scaffold_1: 4727038-4729770 Arabidopsis lyrata
AL1G22920 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 4727038-4727537 Arabidopsis lyrata
AL1G22920 0.5kb downstream 0.5kb downstream 2733   true scaffold_1: 4727538-4730270 Arabidopsis lyrata
AL1G22920 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 4729771-4730270 Arabidopsis lyrata
AL1G22920 1.0kb upstream 1.0kb upstream 3233   true scaffold_1: 4726538-4729770 Arabidopsis lyrata
AL1G22920 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 4726538-4727537 Arabidopsis lyrata
AL1G22920 1.0kb downstream 1.0kb downstream 3233   true scaffold_1: 4727538-4730770 Arabidopsis lyrata
AL1G22920 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 4729771-4730770 Arabidopsis lyrata
AL1G22920 2.0kb upstream 2.0kb upstream 4233   true scaffold_1: 4725538-4729770 Arabidopsis lyrata
AL1G22920 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 4725538-4727537 Arabidopsis lyrata
AL1G22920 2.0kb downstream 2.0kb downstream 4233   true scaffold_1: 4727538-4731770 Arabidopsis lyrata
AL1G22920 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 4729771-4731770 Arabidopsis lyrata
AL1G22920 5.0kb upstream 5.0kb upstream 7233   true scaffold_1: 4722538-4729770 Arabidopsis lyrata
AL1G22920 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 4722538-4727537 Arabidopsis lyrata
AL1G22920 5.0kb downstream 5.0kb downstream 7233   true scaffold_1: 4727538-4734770 Arabidopsis lyrata
AL1G22920 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 4729771-4734770 Arabidopsis lyrata
AL1G22920 10.0kb upstream 10.0kb upstream 12233   true scaffold_1: 4717538-4729770 Arabidopsis lyrata
AL1G22920 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 4717538-4727537 Arabidopsis lyrata
AL1G22920 10.0kb downstream 10.0kb downstream 12233   true scaffold_1: 4727538-4739770 Arabidopsis lyrata
AL1G22920 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 4729771-4739770 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380079 5261 Brassicaceae View MSA
123841617 5264 Brassicales-Malvales View MSA
124340575 5266 SBM View MSA
124240100 5268 Malvidae View MSA
124064869 5270 Rosid View MSA
123736834 5271 Pentapetalae View MSA
122789867 5272 Eudicot View MSA
122046874 5273 Angiosperm View MSA
121344835 5274 Embryophyte View MSA
123426609 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain