Gene : AL1G20530 A. lyrata v2.1

Defline:  (1 of 1) PTHR22601:SF23 - OLIGOPEPTIDE TRANSPORTER 2 Genomic Order:  1003
Name:  ? AL1G20530 Secondary Identifier:  ? PAC:35932399

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G20530 0.5kb upstream 0.5kb upstream 3242   true scaffold_1: 3782541-3785782 Arabidopsis lyrata
AL1G20530 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 3785283-3785782 Arabidopsis lyrata
AL1G20530 0.5kb downstream 0.5kb downstream 3242   true scaffold_1: 3782041-3785282 Arabidopsis lyrata
AL1G20530 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 3782041-3782540 Arabidopsis lyrata
AL1G20530 1.0kb upstream 1.0kb upstream 3742   true scaffold_1: 3782541-3786282 Arabidopsis lyrata
AL1G20530 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 3785283-3786282 Arabidopsis lyrata
AL1G20530 1.0kb downstream 1.0kb downstream 3742   true scaffold_1: 3781541-3785282 Arabidopsis lyrata
AL1G20530 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 3781541-3782540 Arabidopsis lyrata
AL1G20530 2.0kb upstream 2.0kb upstream 4742   true scaffold_1: 3782541-3787282 Arabidopsis lyrata
AL1G20530 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 3785283-3787282 Arabidopsis lyrata
AL1G20530 2.0kb downstream 2.0kb downstream 4742   true scaffold_1: 3780541-3785282 Arabidopsis lyrata
AL1G20530 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 3780541-3782540 Arabidopsis lyrata
AL1G20530 5.0kb upstream 5.0kb upstream 7742   true scaffold_1: 3782541-3790282 Arabidopsis lyrata
AL1G20530 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 3785283-3790282 Arabidopsis lyrata
AL1G20530 5.0kb downstream 5.0kb downstream 7742   true scaffold_1: 3777541-3785282 Arabidopsis lyrata
AL1G20530 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 3777541-3782540 Arabidopsis lyrata
AL1G20530 10.0kb upstream 10.0kb upstream 12742   true scaffold_1: 3782541-3795282 Arabidopsis lyrata
AL1G20530 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 3785283-3795282 Arabidopsis lyrata
AL1G20530 10.0kb downstream 10.0kb downstream 12742   true scaffold_1: 3772541-3785282 Arabidopsis lyrata
AL1G20530 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 3772541-3782540 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364946 5261 Brassicaceae View MSA
123830222 5264 Brassicales-Malvales View MSA
124342659 5266 SBM View MSA
124240849 5268 Malvidae View MSA
124072346 5270 Rosid View MSA
123738802 5271 Pentapetalae View MSA
122788637 5272 Eudicot View MSA
122046931 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain