Gene : Tp57577_TGAC_v2_gene28489 T. pratense v2
Defline:  (1 of 3) PTHR10891//PTHR10891:SF533 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1474
Name:  ? Tp57577_TGAC_v2_gene28489 Secondary Identifier:  ? PAC:35964353
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28489 0.5kb upstream 0.5kb upstream 1586 true Tp57577_TGAC_v2_LG4: 14050793-14052378 Trifolium pratense
Tp57577_TGAC_v2_gene28489 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 14050793-14051292 Trifolium pratense
Tp57577_TGAC_v2_gene28489 0.5kb downstream 0.5kb downstream 1586 true Tp57577_TGAC_v2_LG4: 14051293-14052878 Trifolium pratense
Tp57577_TGAC_v2_gene28489 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 14052379-14052878 Trifolium pratense
Tp57577_TGAC_v2_gene28489 1.0kb upstream 1.0kb upstream 2086 true Tp57577_TGAC_v2_LG4: 14050293-14052378 Trifolium pratense
Tp57577_TGAC_v2_gene28489 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 14050293-14051292 Trifolium pratense
Tp57577_TGAC_v2_gene28489 1.0kb downstream 1.0kb downstream 2086 true Tp57577_TGAC_v2_LG4: 14051293-14053378 Trifolium pratense
Tp57577_TGAC_v2_gene28489 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 14052379-14053378 Trifolium pratense
Tp57577_TGAC_v2_gene28489 2.0kb upstream 2.0kb upstream 3086 true Tp57577_TGAC_v2_LG4: 14049293-14052378 Trifolium pratense
Tp57577_TGAC_v2_gene28489 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 14049293-14051292 Trifolium pratense
Tp57577_TGAC_v2_gene28489 2.0kb downstream 2.0kb downstream 3086 true Tp57577_TGAC_v2_LG4: 14051293-14054378 Trifolium pratense
Tp57577_TGAC_v2_gene28489 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 14052379-14054378 Trifolium pratense
Tp57577_TGAC_v2_gene28489 5.0kb upstream 5.0kb upstream 6086 true Tp57577_TGAC_v2_LG4: 14046293-14052378 Trifolium pratense
Tp57577_TGAC_v2_gene28489 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 14046293-14051292 Trifolium pratense
Tp57577_TGAC_v2_gene28489 5.0kb downstream 5.0kb downstream 6086 true Tp57577_TGAC_v2_LG4: 14051293-14057378 Trifolium pratense
Tp57577_TGAC_v2_gene28489 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 14052379-14057378 Trifolium pratense
Tp57577_TGAC_v2_gene28489 10.0kb upstream 10.0kb upstream 11086 true Tp57577_TGAC_v2_LG4: 14041293-14052378 Trifolium pratense
Tp57577_TGAC_v2_gene28489 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 14041293-14051292 Trifolium pratense
Tp57577_TGAC_v2_gene28489 10.0kb downstream 10.0kb downstream 11086 true Tp57577_TGAC_v2_LG4: 14051293-14062378 Trifolium pratense
Tp57577_TGAC_v2_gene28489 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 14052379-14062378 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302168 5265 Fabidae View MSA
124064178 5270 Rosid View MSA
123753496 5271 Pentapetalae View MSA
122789442 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain