Gene : Tp57577_TGAC_v2_gene29055 T. pratense v2
Defline:  (1 of 1) K14864 - tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205] (FTSJ1, TRM7) Genomic Order:  953
Name:  ? Tp57577_TGAC_v2_gene29055 Secondary Identifier:  ? PAC:35963511
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6829 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene29055 0.5kb upstream 0.5kb upstream 6173 true Tp57577_TGAC_v2_LG4: 8794703-8800875 Trifolium pratense
Tp57577_TGAC_v2_gene29055 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 8800376-8800875 Trifolium pratense
Tp57577_TGAC_v2_gene29055 0.5kb downstream 0.5kb downstream 6173 true Tp57577_TGAC_v2_LG4: 8794203-8800375 Trifolium pratense
Tp57577_TGAC_v2_gene29055 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 8794203-8794702 Trifolium pratense
Tp57577_TGAC_v2_gene29055 1.0kb upstream 1.0kb upstream 6673 true Tp57577_TGAC_v2_LG4: 8794703-8801375 Trifolium pratense
Tp57577_TGAC_v2_gene29055 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 8800376-8801375 Trifolium pratense
Tp57577_TGAC_v2_gene29055 1.0kb downstream 1.0kb downstream 6673 true Tp57577_TGAC_v2_LG4: 8793703-8800375 Trifolium pratense
Tp57577_TGAC_v2_gene29055 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 8793703-8794702 Trifolium pratense
Tp57577_TGAC_v2_gene29055 2.0kb upstream 2.0kb upstream 7673 true Tp57577_TGAC_v2_LG4: 8794703-8802375 Trifolium pratense
Tp57577_TGAC_v2_gene29055 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 8800376-8802375 Trifolium pratense
Tp57577_TGAC_v2_gene29055 2.0kb downstream 2.0kb downstream 7673 true Tp57577_TGAC_v2_LG4: 8792703-8800375 Trifolium pratense
Tp57577_TGAC_v2_gene29055 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 8792703-8794702 Trifolium pratense
Tp57577_TGAC_v2_gene29055 5.0kb upstream 5.0kb upstream 10673 true Tp57577_TGAC_v2_LG4: 8794703-8805375 Trifolium pratense
Tp57577_TGAC_v2_gene29055 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 8800376-8805375 Trifolium pratense
Tp57577_TGAC_v2_gene29055 5.0kb downstream 5.0kb downstream 10673 true Tp57577_TGAC_v2_LG4: 8789703-8800375 Trifolium pratense
Tp57577_TGAC_v2_gene29055 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 8789703-8794702 Trifolium pratense
Tp57577_TGAC_v2_gene29055 10.0kb upstream 10.0kb upstream 15673 true Tp57577_TGAC_v2_LG4: 8794703-8810375 Trifolium pratense
Tp57577_TGAC_v2_gene29055 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 8800376-8810375 Trifolium pratense
Tp57577_TGAC_v2_gene29055 10.0kb downstream 10.0kb downstream 15673 true Tp57577_TGAC_v2_LG4: 8784703-8800375 Trifolium pratense
Tp57577_TGAC_v2_gene29055 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 8784703-8794702 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312091 5265 Fabidae View MSA
124067188 5270 Rosid View MSA
123742065 5271 Pentapetalae View MSA
122791552 5272 Eudicot View MSA
122044785 5273 Angiosperm View MSA
121347520 5274 Embryophyte View MSA
123424894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain