Gene : Tp57577_TGAC_v2_gene26477 T. pratense v2
Defline:  (1 of 1) PTHR10891//PTHR10891:SF546 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  472
Name:  ? Tp57577_TGAC_v2_gene26477 Secondary Identifier:  ? PAC:35964984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26477 0.5kb upstream 0.5kb upstream 1955 true Tp57577_TGAC_v2_LG4: 4013810-4015764 Trifolium pratense
Tp57577_TGAC_v2_gene26477 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 4015265-4015764 Trifolium pratense
Tp57577_TGAC_v2_gene26477 0.5kb downstream 0.5kb downstream 1955 true Tp57577_TGAC_v2_LG4: 4013310-4015264 Trifolium pratense
Tp57577_TGAC_v2_gene26477 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 4013310-4013809 Trifolium pratense
Tp57577_TGAC_v2_gene26477 1.0kb upstream 1.0kb upstream 2455 true Tp57577_TGAC_v2_LG4: 4013810-4016264 Trifolium pratense
Tp57577_TGAC_v2_gene26477 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 4015265-4016264 Trifolium pratense
Tp57577_TGAC_v2_gene26477 1.0kb downstream 1.0kb downstream 2455 true Tp57577_TGAC_v2_LG4: 4012810-4015264 Trifolium pratense
Tp57577_TGAC_v2_gene26477 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 4012810-4013809 Trifolium pratense
Tp57577_TGAC_v2_gene26477 2.0kb upstream 2.0kb upstream 3455 true Tp57577_TGAC_v2_LG4: 4013810-4017264 Trifolium pratense
Tp57577_TGAC_v2_gene26477 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 4015265-4017264 Trifolium pratense
Tp57577_TGAC_v2_gene26477 2.0kb downstream 2.0kb downstream 3455 true Tp57577_TGAC_v2_LG4: 4011810-4015264 Trifolium pratense
Tp57577_TGAC_v2_gene26477 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 4011810-4013809 Trifolium pratense
Tp57577_TGAC_v2_gene26477 5.0kb upstream 5.0kb upstream 6455 true Tp57577_TGAC_v2_LG4: 4013810-4020264 Trifolium pratense
Tp57577_TGAC_v2_gene26477 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 4015265-4020264 Trifolium pratense
Tp57577_TGAC_v2_gene26477 5.0kb downstream 5.0kb downstream 6455 true Tp57577_TGAC_v2_LG4: 4008810-4015264 Trifolium pratense
Tp57577_TGAC_v2_gene26477 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 4008810-4013809 Trifolium pratense
Tp57577_TGAC_v2_gene26477 10.0kb upstream 10.0kb upstream 11455 true Tp57577_TGAC_v2_LG4: 4013810-4025264 Trifolium pratense
Tp57577_TGAC_v2_gene26477 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 4015265-4025264 Trifolium pratense
Tp57577_TGAC_v2_gene26477 10.0kb downstream 10.0kb downstream 11455 true Tp57577_TGAC_v2_LG4: 4003810-4015264 Trifolium pratense
Tp57577_TGAC_v2_gene26477 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 4003810-4013809 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028011 5273 Angiosperm View MSA
122302288 5265 Fabidae View MSA
124071091 5270 Rosid View MSA
123752599 5271 Pentapetalae View MSA
122791242 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain