Gene : Tp57577_TGAC_v2_gene3340 T. pratense v2
Defline:  (1 of 3) PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Genomic Order:  2396
Name:  ? Tp57577_TGAC_v2_gene3340 Secondary Identifier:  ? PAC:35964797
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3340 0.5kb upstream 0.5kb upstream 2476 true Tp57577_TGAC_v2_LG4: 22586934-22589409 Trifolium pratense
Tp57577_TGAC_v2_gene3340 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 22586934-22587433 Trifolium pratense
Tp57577_TGAC_v2_gene3340 0.5kb downstream 0.5kb downstream 2476 true Tp57577_TGAC_v2_LG4: 22587434-22589909 Trifolium pratense
Tp57577_TGAC_v2_gene3340 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 22589410-22589909 Trifolium pratense
Tp57577_TGAC_v2_gene3340 1.0kb upstream 1.0kb upstream 2976 true Tp57577_TGAC_v2_LG4: 22586434-22589409 Trifolium pratense
Tp57577_TGAC_v2_gene3340 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 22586434-22587433 Trifolium pratense
Tp57577_TGAC_v2_gene3340 1.0kb downstream 1.0kb downstream 2976 true Tp57577_TGAC_v2_LG4: 22587434-22590409 Trifolium pratense
Tp57577_TGAC_v2_gene3340 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 22589410-22590409 Trifolium pratense
Tp57577_TGAC_v2_gene3340 2.0kb upstream 2.0kb upstream 3976 true Tp57577_TGAC_v2_LG4: 22585434-22589409 Trifolium pratense
Tp57577_TGAC_v2_gene3340 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 22585434-22587433 Trifolium pratense
Tp57577_TGAC_v2_gene3340 2.0kb downstream 2.0kb downstream 3976 true Tp57577_TGAC_v2_LG4: 22587434-22591409 Trifolium pratense
Tp57577_TGAC_v2_gene3340 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 22589410-22591409 Trifolium pratense
Tp57577_TGAC_v2_gene3340 5.0kb upstream 5.0kb upstream 6976 true Tp57577_TGAC_v2_LG4: 22582434-22589409 Trifolium pratense
Tp57577_TGAC_v2_gene3340 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 22582434-22587433 Trifolium pratense
Tp57577_TGAC_v2_gene3340 5.0kb downstream 5.0kb downstream 6976 true Tp57577_TGAC_v2_LG4: 22587434-22594409 Trifolium pratense
Tp57577_TGAC_v2_gene3340 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 22589410-22594409 Trifolium pratense
Tp57577_TGAC_v2_gene3340 10.0kb upstream 10.0kb upstream 11976 true Tp57577_TGAC_v2_LG4: 22577434-22589409 Trifolium pratense
Tp57577_TGAC_v2_gene3340 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 22577434-22587433 Trifolium pratense
Tp57577_TGAC_v2_gene3340 10.0kb downstream 10.0kb downstream 11976 true Tp57577_TGAC_v2_LG4: 22587434-22599409 Trifolium pratense
Tp57577_TGAC_v2_gene3340 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 22589410-22599409 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297931 5265 Fabidae View MSA
124072575 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain