Gene : Tp57577_TGAC_v2_gene38605 T. pratense v2
Defline:  (1 of 3) K18660 - malonyl-CoA/methylmalonyl-CoA synthetase (ACSF3) Genomic Order:  2524
Name:  ? Tp57577_TGAC_v2_gene38605 Secondary Identifier:  ? PAC:35966546
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Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1121 Trifolium pratense pathologic  
Tpratense PWY-321 Trifolium pratense pathologic  
Tpratense PWY-5136 Trifolium pratense pathologic  
Tpratense PWY-5143 Trifolium pratense pathologic  
Tpratense PWY-5147 Trifolium pratense pathologic  
Tpratense PWY-5156 Trifolium pratense pathologic  
Tpratense PWY-561 Trifolium pratense pathologic  
Tpratense PWY-5885 Trifolium pratense pathologic  
Tpratense PWY-5971 Trifolium pratense pathologic  
Tpratense PWY-5989 Trifolium pratense pathologic  
Tpratense PWY66-389 Trifolium pratense pathologic  
Tpratense PWY-6733 Trifolium pratense pathologic  
Tpratense PWY-6803 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38605 0.5kb upstream 0.5kb upstream 7532 true Tp57577_TGAC_v2_LG4: 23712707-23720238 Trifolium pratense
Tp57577_TGAC_v2_gene38605 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 23719739-23720238 Trifolium pratense
Tp57577_TGAC_v2_gene38605 0.5kb downstream 0.5kb downstream 7532 true Tp57577_TGAC_v2_LG4: 23712207-23719738 Trifolium pratense
Tp57577_TGAC_v2_gene38605 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 23712207-23712706 Trifolium pratense
Tp57577_TGAC_v2_gene38605 1.0kb upstream 1.0kb upstream 8032 true Tp57577_TGAC_v2_LG4: 23712707-23720738 Trifolium pratense
Tp57577_TGAC_v2_gene38605 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 23719739-23720738 Trifolium pratense
Tp57577_TGAC_v2_gene38605 1.0kb downstream 1.0kb downstream 8032 true Tp57577_TGAC_v2_LG4: 23711707-23719738 Trifolium pratense
Tp57577_TGAC_v2_gene38605 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 23711707-23712706 Trifolium pratense
Tp57577_TGAC_v2_gene38605 2.0kb upstream 2.0kb upstream 9032 true Tp57577_TGAC_v2_LG4: 23712707-23721738 Trifolium pratense
Tp57577_TGAC_v2_gene38605 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 23719739-23721738 Trifolium pratense
Tp57577_TGAC_v2_gene38605 2.0kb downstream 2.0kb downstream 9032 true Tp57577_TGAC_v2_LG4: 23710707-23719738 Trifolium pratense
Tp57577_TGAC_v2_gene38605 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 23710707-23712706 Trifolium pratense
Tp57577_TGAC_v2_gene38605 5.0kb upstream 5.0kb upstream 12032 true Tp57577_TGAC_v2_LG4: 23712707-23724738 Trifolium pratense
Tp57577_TGAC_v2_gene38605 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 23719739-23724738 Trifolium pratense
Tp57577_TGAC_v2_gene38605 5.0kb downstream 5.0kb downstream 12032 true Tp57577_TGAC_v2_LG4: 23707707-23719738 Trifolium pratense
Tp57577_TGAC_v2_gene38605 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 23707707-23712706 Trifolium pratense
Tp57577_TGAC_v2_gene38605 10.0kb upstream 10.0kb upstream 17032 true Tp57577_TGAC_v2_LG4: 23712707-23729738 Trifolium pratense
Tp57577_TGAC_v2_gene38605 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 23719739-23729738 Trifolium pratense
Tp57577_TGAC_v2_gene38605 10.0kb downstream 10.0kb downstream 17032 true Tp57577_TGAC_v2_LG4: 23702707-23719738 Trifolium pratense
Tp57577_TGAC_v2_gene38605 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 23702707-23712706 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026195 5273 Angiosperm View MSA
122302271 5265 Fabidae View MSA
124061502 5270 Rosid View MSA
123737714 5271 Pentapetalae View MSA
122789528 5272 Eudicot View MSA
121347572 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain