Gene : Tp57577_TGAC_v2_gene36829 T. pratense v2
Defline:  (1 of 2) PF07557 - Shugoshin C terminus (Shugoshin_C) Genomic Order:  2031
Name:  ? Tp57577_TGAC_v2_gene36829 Secondary Identifier:  ? PAC:35964930
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene36829 0.5kb upstream 0.5kb upstream 4259 true Tp57577_TGAC_v2_LG4: 19128009-19132267 Trifolium pratense
Tp57577_TGAC_v2_gene36829 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 19131768-19132267 Trifolium pratense
Tp57577_TGAC_v2_gene36829 0.5kb downstream 0.5kb downstream 4259 true Tp57577_TGAC_v2_LG4: 19127509-19131767 Trifolium pratense
Tp57577_TGAC_v2_gene36829 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 19127509-19128008 Trifolium pratense
Tp57577_TGAC_v2_gene36829 1.0kb upstream 1.0kb upstream 4759 true Tp57577_TGAC_v2_LG4: 19128009-19132767 Trifolium pratense
Tp57577_TGAC_v2_gene36829 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 19131768-19132767 Trifolium pratense
Tp57577_TGAC_v2_gene36829 1.0kb downstream 1.0kb downstream 4759 true Tp57577_TGAC_v2_LG4: 19127009-19131767 Trifolium pratense
Tp57577_TGAC_v2_gene36829 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 19127009-19128008 Trifolium pratense
Tp57577_TGAC_v2_gene36829 2.0kb upstream 2.0kb upstream 5759 true Tp57577_TGAC_v2_LG4: 19128009-19133767 Trifolium pratense
Tp57577_TGAC_v2_gene36829 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 19131768-19133767 Trifolium pratense
Tp57577_TGAC_v2_gene36829 2.0kb downstream 2.0kb downstream 5759 true Tp57577_TGAC_v2_LG4: 19126009-19131767 Trifolium pratense
Tp57577_TGAC_v2_gene36829 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 19126009-19128008 Trifolium pratense
Tp57577_TGAC_v2_gene36829 5.0kb upstream 5.0kb upstream 8759 true Tp57577_TGAC_v2_LG4: 19128009-19136767 Trifolium pratense
Tp57577_TGAC_v2_gene36829 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 19131768-19136767 Trifolium pratense
Tp57577_TGAC_v2_gene36829 5.0kb downstream 5.0kb downstream 8759 true Tp57577_TGAC_v2_LG4: 19123009-19131767 Trifolium pratense
Tp57577_TGAC_v2_gene36829 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 19123009-19128008 Trifolium pratense
Tp57577_TGAC_v2_gene36829 10.0kb upstream 10.0kb upstream 13759 true Tp57577_TGAC_v2_LG4: 19128009-19141767 Trifolium pratense
Tp57577_TGAC_v2_gene36829 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 19131768-19141767 Trifolium pratense
Tp57577_TGAC_v2_gene36829 10.0kb downstream 10.0kb downstream 13759 true Tp57577_TGAC_v2_LG4: 19118009-19131767 Trifolium pratense
Tp57577_TGAC_v2_gene36829 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 19118009-19128008 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028020 5273 Angiosperm View MSA
122306201 5265 Fabidae View MSA
124074097 5270 Rosid View MSA
123746067 5271 Pentapetalae View MSA
122795330 5272 Eudicot View MSA
121349389 5274 Embryophyte View MSA
123381292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain