Gene : Tp57577_TGAC_v2_gene3482 T. pratense v2
Defline:  (1 of 1) 2.7.1.35 - Pyridoxal kinase / Vitamin B6 kinase Genomic Order:  1218
Name:  ? Tp57577_TGAC_v2_gene3482 Secondary Identifier:  ? PAC:35964263
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PLPSAL-PWY Trifolium pratense pathologic  
Tpratense PWY-7204 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3482 0.5kb upstream 0.5kb upstream 7862 true Tp57577_TGAC_v2_LG4: 11565210-11573071 Trifolium pratense
Tp57577_TGAC_v2_gene3482 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 11572572-11573071 Trifolium pratense
Tp57577_TGAC_v2_gene3482 0.5kb downstream 0.5kb downstream 7862 true Tp57577_TGAC_v2_LG4: 11564710-11572571 Trifolium pratense
Tp57577_TGAC_v2_gene3482 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 11564710-11565209 Trifolium pratense
Tp57577_TGAC_v2_gene3482 1.0kb upstream 1.0kb upstream 8362 true Tp57577_TGAC_v2_LG4: 11565210-11573571 Trifolium pratense
Tp57577_TGAC_v2_gene3482 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 11572572-11573571 Trifolium pratense
Tp57577_TGAC_v2_gene3482 1.0kb downstream 1.0kb downstream 8362 true Tp57577_TGAC_v2_LG4: 11564210-11572571 Trifolium pratense
Tp57577_TGAC_v2_gene3482 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 11564210-11565209 Trifolium pratense
Tp57577_TGAC_v2_gene3482 2.0kb upstream 2.0kb upstream 9362 true Tp57577_TGAC_v2_LG4: 11565210-11574571 Trifolium pratense
Tp57577_TGAC_v2_gene3482 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 11572572-11574571 Trifolium pratense
Tp57577_TGAC_v2_gene3482 2.0kb downstream 2.0kb downstream 9362 true Tp57577_TGAC_v2_LG4: 11563210-11572571 Trifolium pratense
Tp57577_TGAC_v2_gene3482 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 11563210-11565209 Trifolium pratense
Tp57577_TGAC_v2_gene3482 5.0kb upstream 5.0kb upstream 12362 true Tp57577_TGAC_v2_LG4: 11565210-11577571 Trifolium pratense
Tp57577_TGAC_v2_gene3482 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 11572572-11577571 Trifolium pratense
Tp57577_TGAC_v2_gene3482 5.0kb downstream 5.0kb downstream 12362 true Tp57577_TGAC_v2_LG4: 11560210-11572571 Trifolium pratense
Tp57577_TGAC_v2_gene3482 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 11560210-11565209 Trifolium pratense
Tp57577_TGAC_v2_gene3482 10.0kb upstream 10.0kb upstream 17362 true Tp57577_TGAC_v2_LG4: 11565210-11582571 Trifolium pratense
Tp57577_TGAC_v2_gene3482 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 11572572-11582571 Trifolium pratense
Tp57577_TGAC_v2_gene3482 10.0kb downstream 10.0kb downstream 17362 true Tp57577_TGAC_v2_LG4: 11555210-11572571 Trifolium pratense
Tp57577_TGAC_v2_gene3482 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 11555210-11565209 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041254 5273 Angiosperm View MSA
122301609 5265 Fabidae View MSA
124064759 5270 Rosid View MSA
123749483 5271 Pentapetalae View MSA
122793102 5272 Eudicot View MSA
121343992 5274 Embryophyte View MSA
123424981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain